Lysinibacillus endophyticus str. DSM 100506

RodMotile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Ureibacillus

Description

Lysinibacillus endophyticus strain DSM 100506 is a soil-dwelling, mesophilic bacterium characterized by its rod-shaped morphology and the ability to form chains. This organism is classified as a chemoheterotroph, indicating that it derives energy from organic compounds, which is typical for many soil bacteria that contribute to nutrient cycling in their ecosystems. One notable feature of L. endophyticus is its mobility, facilitated by the presence of flagella. This motility may play a role in its ability to navigate through the soil environment, allowing it to access nutrients and interact with other microorganisms. Additionally, it is capable of sporulation, a survival mechanism that enables the bacterium to endure unfavorable environmental conditions. The genomic data for L. endophyticus is accessible under the accession number RBZN00000000.1, which provides a resource for further study of its genetic characteristics and potential applications. With a single replicon, the structure of its genome may enable efficient replication and adaptation to its habitat. Ecologically, Lysinibacillus endophyticus likely contributes to soil health by participating in the decomposition of organic matter and potentially supporting plant growth through its endophytic associations. The ability to form spores suggests that it can persist in varying soil conditions, thereby playing a crucial role in maintaining microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusUreibacillus
SpeciesUreibacillus endophyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lysinibacillus endophyticus strain DSM 100506

Gene Summary

Adenine Count

1149229 bp

Thymine Count

1149828 bp

Guanine Count

613854 bp

Cytosine Count

621825 bp

Genome Length

3534833 bp

Protein-coding Genes

3375 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
micrococcal nucleaseD8M03_07135Not AvailablePositive1448668 - 144927923351.6
aldehyde dehydrogenaseD8M03_07140Not AvailablePositive1449676 - 145106452384.6
m42 family peptidaseD8M03_07145Not AvailablePositive1451282 - 145234039325.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseD8M03_07150Not AvailablePositive1452348 - 145381753993.5
peptide chain release factor 3D8M03_07155Not AvailablePositive1453945 - 145552260041.9
3-beta hydroxysteroid dehydrogenaseD8M03_07160Not AvailablePositive1455717 - 145680241236.3
hypothetical proteinD8M03_07165Not AvailablePositive1457099 - 145787828857.2
trkh family potassium uptake proteinD8M03_07170Not AvailablePositive1457980 - 145932949932.1
ghkl domain-containing proteinD8M03_07175Not AvailablePositive1459819 - 146125554752.0
marr family transcriptional regulatorD8M03_07180Not AvailablePositive1461333 - 146177916898.4

Displaying genes 1421 – 1430 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.