Lysinibacillus endophyticus str. DSM 100506

RodMotile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Ureibacillus

Description

Lysinibacillus endophyticus strain DSM 100506 is a rod-shaped, sporulating bacterium characterized by its arrangement in chains and its classification as a chemoheterotroph, deriving energy from organic compounds. This strain is isolated from soil environments, indicating its potential role in the nutrient cycling processes within terrestrial ecosystems. The sporulation capability of L. endophyticus suggests a resilience to environmental stresses, which is common in soil-dwelling microbes that must withstand fluctuations in moisture, temperature, and nutrient availability. Its chain formation may enhance its survival by facilitating cell-to-cell interactions, potentially influencing its ecological functions and interactions with other soil microorganisms. Given its habitat and traits, L. endophyticus could play a significant role in the soil microbiome, contributing to organic matter decomposition and nutrient mobilization. This could have implications for plant health and soil fertility, highlighting the importance of such bacteria in agroecosystems. Further research could elucidate its specific interactions in soil microbiomes and its potential applications in sustainable agriculture.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusUreibacillus
SpeciesUreibacillus endophyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lysinibacillus endophyticus str. DSM 100506


Gene Summary

Adenine Count

1149229 bp

Thymine Count

1149828 bp

Guanine Count

613854 bp

Cytosine Count

621825 bp

Genome Length

3534833 bp

Protein-coding Genes

3375 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+28 - 1577Not Available
23s ribosomal rnaNot AvailableNot Available+46 - 2971Not Available
5s ribosomal rnaNot AvailableNot Available+209 - 324Not Available
membrane dipeptidaseD8M03_00005Not Available+239 - 117434961.9
5s ribosomal rnaNot AvailableNot Available+1143 - 1258Not Available
isochorismate synthaseD8M03_00010Not Available+1424 - 280952271.6
Ncrna_class:otherNot AvailableNot Available+1493 - 1683Not Available
Ncrna_class:otherNot AvailableNot Available+2211 - 2402Not Available
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseD8M03_00015Not Available+2802 - 451764623.6
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseD8M03_00020Not Available+4514 - 533230449.9

Displaying genes 1 – 10 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites