Petrimonas sp. IBARAKI

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Dysgonomonadaceae

Genus

Petrimonas

Description

Petrimonas sp. IBARAKI is a Gram-negative bacterium characterized by its rod-shaped morphology. This microorganism possesses a single replicon, indicating a streamlined genetic structure conducive to its adaptability and survival in various environments. Its genetic information can be accessed through the accession number AP018040.2, which provides a reference for further genomic studies. The classification of Petrimonas sp. within the broader microbial community highlights its potential ecological role. As a Gram-negative bacterium, it may possess a complex outer membrane that could influence its interactions with other organisms and the environment. Gram-negative bacteria are often involved in nutrient cycling and can play significant roles in biogeochemical processes, such as the decomposition of organic matter and the transformation of nutrients. Understanding the characteristics of Petrimonas sp. IBARAKI can provide insights into its ecological niche and potential applications in biotechnology or environmental management. Its single replicon may suggest efficiency in replication and resource utilization, which could be advantageous in competitive environments. The study of this bacterium could contribute to a deeper understanding of microbial diversity and the functional roles of bacteria in their respective ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyDysgonomonadaceae
GenusPetrimonas
SpeciesPetrimonas sp. IBARAKI
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Petrimonas sp. IBARAKI DNA, complete genome.

Gene Summary

Adenine Count

1032698 bp

Thymine Count

1036227 bp

Guanine Count

812372 bp

Cytosine Count

811936 bp

Genome Length

3693233 bp

Protein-coding Genes

2992 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s14PEIBARAKI_6231Not AvailableNegative2730647 - 273091610201.6
50s ribosomal protein l5PEIBARAKI_6232Not AvailableNegative2730920 - 273158224646.1
ribosomal protein l24PEIBARAKI_6233Not AvailableNegative2731582 - 273190211526.1
50s ribosomal protein l14PEIBARAKI_6234Not AvailableNegative2731924 - 273228913196.2
30s ribosomal protein s17PEIBARAKI_6235Not AvailableNegative2732291 - 273254810157.5
50s ribosomal protein l29PEIBARAKI_6236Not AvailableNegative2732557 - 27327607929.49
50s ribosomal protein l16PEIBARAKI_6237Not AvailableNegative2732771 - 273319916075.7
30s ribosomal protein s3PEIBARAKI_6238Not AvailableNegative2733206 - 273397028130.2
ribosomal protein l22PEIBARAKI_6239Not AvailableNegative2733980 - 273439015673.1
30s ribosomal protein s19PEIBARAKI_6240Not AvailableNegative2734426 - 273469510000.2

Displaying genes 2271 – 2280 of 3047 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.