Limnohabitans sp. Jir72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Jir72 is characterized by having a single replicon, which is a significant trait as it suggests a streamlined genomic structure. The genome of this bacterium is available under the accession number NESC00000000.1, allowing for further study and analysis of its genetic composition and potential functionalities. This bacterium belongs to a group known for its adaptability to freshwater environments, indicating its ecological role in aquatic systems. The single replicon trait may confer advantages in terms of replication efficiency and resource utilization in fluctuating environments, typical of freshwater habitats. This adaptability could play a crucial role in nutrient cycling and the maintenance of microbial diversity in its ecosystem. In summary, Limnohabitans sp. Jir72 is a single-replicon bacterium with a genome accessible for research, contributing to our understanding of microbial life in freshwater environments. Its structural characteristics suggest potential ecological roles that merit further investigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Jir72
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Jir72 LimC-Jir72-C45, whole genome shotgun

Gene Summary

Adenine Count

758022 bp

Thymine Count

748162 bp

Guanine Count

1085137 bp

Cytosine Count

1095431 bp

Genome Length

3686752 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome small subunit-dependent gtpase aB9Z52_11930Not AvailableNegative2520022 - 252099335854.6
pterin-4-alpha-carbinolamine dehydrataseB9Z52_11935Not AvailableNegative2520990 - 252130111478.8
peptidase m48B9Z52_11940Not AvailableNegative2521298 - 252255745972.8
oligoribonucleaseB9Z52_11945Not AvailablePositive2522626 - 252321322172.5
dead/deah box helicaseB9Z52_11950Not AvailablePositive2523476 - 252555174789.2
50s ribosomal protein l19B9Z52_11955Not AvailableNegative2525713 - 252609614126.2
trna (guanosine(37)-n1)-methyltransferase trmdB9Z52_11960Not AvailableNegative2526217 - 252696927924.2
ribosome maturation factor rimmB9Z52_11965Not AvailableNegative2526999 - 252761622464.8
30s ribosomal protein s16B9Z52_11970Not AvailableNegative2527633 - 25278849316.34
gnat family n-acetyltransferaseB9Z52_11975Not AvailablePositive2528020 - 252854118834.6

Displaying genes 2361 – 2370 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.