Limnohabitans sp. Jir72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Jir72 is characterized by having a single replicon, which is a significant trait as it suggests a streamlined genomic structure. The genome of this bacterium is available under the accession number NESC00000000.1, allowing for further study and analysis of its genetic composition and potential functionalities. This bacterium belongs to a group known for its adaptability to freshwater environments, indicating its ecological role in aquatic systems. The single replicon trait may confer advantages in terms of replication efficiency and resource utilization in fluctuating environments, typical of freshwater habitats. This adaptability could play a crucial role in nutrient cycling and the maintenance of microbial diversity in its ecosystem. In summary, Limnohabitans sp. Jir72 is a single-replicon bacterium with a genome accessible for research, contributing to our understanding of microbial life in freshwater environments. Its structural characteristics suggest potential ecological roles that merit further investigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Jir72
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Jir72 LimC-Jir72-C45, whole genome shotgun

Gene Summary

Adenine Count

758022 bp

Thymine Count

748162 bp

Guanine Count

1085137 bp

Cytosine Count

1095431 bp

Genome Length

3686752 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xylose isomeraseB9Z52_11210Not AvailableNegative2381070 - 238195132347.9
4-hydroxyphenylpyruvate dioxygenaseB9Z52_11215Not AvailableNegative2381960 - 238283532262.5
shikimate dehydrogenaseB9Z52_11220Not AvailableNegative2382979 - 238381229378.6
type ii 3-dehydroquinate dehydrataseB9Z52_11225Not AvailableNegative2383832 - 238427216221.4
abc transporter substrate-binding proteinB9Z52_11230Not AvailableNegative2384336 - 238536737008.0
l-dehydroascorbate transporter large permease subunitB9Z52_11235Not AvailableNegative2385452 - 238672945084.7
c4-dicarboxylate abc transporter permeaseB9Z52_11240Not AvailableNegative2386747 - 238728319792.7
tetr family transcriptional regulatorB9Z52_11245Not AvailableNegative2387384 - 238807626010.9
2-hydroxy-3-oxopropionate reductaseB9Z52_11250Not AvailablePositive2388177 - 238905830338.9
abc transporter atp-binding proteinB9Z52_11255Not AvailableNegative2389122 - 238987126902.1

Displaying genes 2221 – 2230 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.