Limnohabitans sp. Jir72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Jir72 is characterized by having a single replicon, which is a significant trait as it suggests a streamlined genomic structure. The genome of this bacterium is available under the accession number NESC00000000.1, allowing for further study and analysis of its genetic composition and potential functionalities. This bacterium belongs to a group known for its adaptability to freshwater environments, indicating its ecological role in aquatic systems. The single replicon trait may confer advantages in terms of replication efficiency and resource utilization in fluctuating environments, typical of freshwater habitats. This adaptability could play a crucial role in nutrient cycling and the maintenance of microbial diversity in its ecosystem. In summary, Limnohabitans sp. Jir72 is a single-replicon bacterium with a genome accessible for research, contributing to our understanding of microbial life in freshwater environments. Its structural characteristics suggest potential ecological roles that merit further investigation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Jir72
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Jir72 LimC-Jir72-C45, whole genome shotgun

Gene Summary

Adenine Count

758022 bp

Thymine Count

748162 bp

Guanine Count

1085137 bp

Cytosine Count

1095431 bp

Genome Length

3686752 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii aldolaseB9Z52_08885Not AvailablePositive1878476 - 187926128441.0
alkene reductaseB9Z52_08890Not AvailablePositive1879358 - 188047639182.2
histidine kinaseB9Z52_08895Not AvailableNegative1880458 - 188187351736.8
dna-binding response regulatorB9Z52_08900Not AvailableNegative1881870 - 188256225600.8
hypothetical proteinB9Z52_08905Not AvailablePositive1882697 - 188395344488.3
cusa/czca family heavy metal efflux rnd transporterB9Z52_08915Not AvailablePositive1885145 - 1888219111418.0
copper-translocating p-type atpaseB9Z52_08920Not AvailableNegative1888388 - 189059577191.5
heavy metal transport/detoxification proteinB9Z52_08925Not AvailablePositive1890661 - 18908587099.49
hypothetical proteinB9Z52_08930Not AvailablePositive1890882 - 18910766777.66
hypothetical proteinB9Z52_08935Not AvailablePositive1891129 - 189201032280.3

Displaying genes 1761 – 1770 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.