Proteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Order

Family

Genus

Description

Proteobacteria is a diverse phylum of bacteria, characterized by a range of metabolic and ecological traits. This particular Proteobacteria bacterium is notable for having five replicons, which suggests a complex genomic organization that may contribute to its adaptability and metabolic versatility. The presence of multiple replicons can facilitate the regulation of gene expression and enable the bacterium to respond effectively to environmental changes. The genomic data for this bacterium is represented by several accession numbers: QGUX00000000.2, QGVD00000000.1, QGUU00000000.1, RXKA00000000.1, and SEDZ00000000.1. These accession numbers correspond to different genomic sequences that may provide insights into the bacterium's evolutionary relationships and functional capabilities. Proteobacteria encompasses a wide range of ecological roles, including some members that are important for nutrient cycling, while others may be pathogenic. The specific traits and behaviors of this bacterium, as indicated by its genomic features, could provide valuable information for understanding its role within its ecosystem. In summary, the five replicons and the associated genomic accessions suggest a complex and potentially adaptable organism within the Proteobacteria phylum. Understanding the specific functions and ecological roles of this bacterium could offer significant insights into microbial ecology and the dynamics of microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudomonadota bacterium isolate PMG_198 scaffold_384496,

Gene Summary

Adenine Count

1868648 bp

Thymine Count

1839271 bp

Guanine Count

1836628 bp

Cytosine Count

1848145 bp

Genome Length

7568293 bp

Protein-coding Genes

6982 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidase family proteinDIU62_012760Not AvailablePositive2458337 - 245892720901.4
hypothetical proteinDIU62_012765Not AvailablePositive2459049 - 24592678663.78
aspartate kinaseDIU62_012770Not AvailablePositive2459314 - 246027534249.2
30s ribosomal protein s13DIU62_012775Not AvailableNegative2460276 - 24603773796.79
50s ribosomal protein l36DIU62_012780Not AvailableNegative2460418 - 24605314371.59
preprotein translocase subunit secyDIU62_012785Not AvailableNegative2460542 - 246188247767.5
50s ribosomal protein l15DIU62_012790Not AvailableNegative2461905 - 246221210600.1
hypothetical proteinDIU62_012795Not AvailablePositive2462213 - 246298427415.2
hypothetical proteinDIU62_012800Not AvailableNegative2463034 - 246333611091.2
excinuclease abc subunit aDIU62_012805Not AvailableNegative2463326 - 246414629524.3

Displaying genes 16571 – 16580 of 16797 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

71 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001763telluriteO3TeChemical structure of telluriteNot available
Average175.6Da
Monoisotopic177.8920638Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da

Displaying 1–10 of 71 metabolites

Health Effects

No health effects information available for this bacterium.