Vibrio sp. HA2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HA2012 is characterized by a single replicon, indicating a relatively simple genomic structure. This bacterium is cataloged under the accession number PFXK00000000.1, which provides a unique identifier for its genetic information within scientific databases. The ecological role of Vibrio species is often significant, as they are commonly found in marine environments and can play important roles in nutrient cycling and ecosystem dynamics. Their presence in coastal waters can also have implications for aquaculture and public health, as some Vibrio species are known to be associated with seafood-borne illnesses. The unique traits of Vibrio sp. HA2012 suggest that it may contribute to the microbial diversity within its habitat, potentially influencing both local ecology and the health of marine organisms. Understanding the genetic and physiological characteristics of Vibrio sp. HA2012 could provide insights into its ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HA2012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HA2012
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HA2012 contig21, whole genome shotgun sequence.

Gene Summary

Adenine Count

1025067 bp

Thymine Count

1027944 bp

Guanine Count

851142 bp

Cytosine Count

853514 bp

Genome Length

3757667 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-1CSW98_02910Not AvailablePositive639891 - 6401098205.1
atp-dependent clp protease atp-binding subunit clpaCSW98_02915Not AvailableNegative640183 - 64245384073.7
atp-dependent clp protease adapter clpsCSW98_02920Not AvailableNegative642504 - 64282412270.7
cold shock domain protein cspdCSW98_02925Not AvailablePositive643283 - 6435078141.53
isocitrate dehydrogenase (nadp(+))CSW98_02930Not AvailableNegative643656 - 64588481004.6
23s rrna pseudouridylate synthaseCSW98_02935Not AvailablePositive646162 - 64682725005.2
trna 2-thiouridine(34) synthase mnmaCSW98_02940Not AvailablePositive646904 - 64801341363.2
lysogenization regulator hfldCSW98_02945Not AvailablePositive648046 - 64866322769.6
adenylosuccinate lyaseCSW98_02950Not AvailablePositive648694 - 65006451345.4
methyl-accepting chemotaxis proteinCSW98_02955Not AvailableNegative650162 - 65227976835.5

Displaying genes 631 – 640 of 3472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.