Vibrio sp. HA2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HA2012 is characterized by a single replicon, indicating a relatively simple genomic structure. This bacterium is cataloged under the accession number PFXK00000000.1, which provides a unique identifier for its genetic information within scientific databases. The ecological role of Vibrio species is often significant, as they are commonly found in marine environments and can play important roles in nutrient cycling and ecosystem dynamics. Their presence in coastal waters can also have implications for aquaculture and public health, as some Vibrio species are known to be associated with seafood-borne illnesses. The unique traits of Vibrio sp. HA2012 suggest that it may contribute to the microbial diversity within its habitat, potentially influencing both local ecology and the health of marine organisms. Understanding the genetic and physiological characteristics of Vibrio sp. HA2012 could provide insights into its ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HA2012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HA2012
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HA2012 contig21, whole genome shotgun sequence.

Gene Summary

Adenine Count

1025067 bp

Thymine Count

1027944 bp

Guanine Count

851142 bp

Cytosine Count

853514 bp

Genome Length

3757667 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(1402)-n(4))-methyltransferaseCSW98_17345Not AvailableNegative3736963 - 373791034907.7
16s rrna (cytidine(1402)-2'-o)-methyltransferaseCSW98_17355Not AvailableNegative3738686 - 373954931962.6
yran family proteinCSW98_17360Not AvailablePositive3739613 - 374148170581.6
yran family proteinCSW98_17365Not AvailablePositive3741468 - 374183614473.5
phosphoheptose isomeraseCSW98_17370Not AvailablePositive3741839 - 374242921111.3
hemolysinCSW98_17375Not AvailablePositive3742433 - 374319427227.5
clpxp protease specificity-enhancing factorCSW98_17380Not AvailableNegative3743315 - 374379117841.2
stringent starvation protein aCSW98_17385Not AvailableNegative3743791 - 374442624267.5
Trna-asnNot AvailableNot AvailablePositive3744632 - 3744707Not Available
Trna-thrNot AvailableNot AvailablePositive3744728 - 3744803Not Available

Displaying genes 3441 – 3450 of 3472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.