Vibrio sp. HA2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HA2012 is characterized by a single replicon, indicating a relatively simple genomic structure. This bacterium is cataloged under the accession number PFXK00000000.1, which provides a unique identifier for its genetic information within scientific databases. The ecological role of Vibrio species is often significant, as they are commonly found in marine environments and can play important roles in nutrient cycling and ecosystem dynamics. Their presence in coastal waters can also have implications for aquaculture and public health, as some Vibrio species are known to be associated with seafood-borne illnesses. The unique traits of Vibrio sp. HA2012 suggest that it may contribute to the microbial diversity within its habitat, potentially influencing both local ecology and the health of marine organisms. Understanding the genetic and physiological characteristics of Vibrio sp. HA2012 could provide insights into its ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HA2012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HA2012
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HA2012 contig21, whole genome shotgun sequence.

Gene Summary

Adenine Count

1025067 bp

Thymine Count

1027944 bp

Guanine Count

851142 bp

Cytosine Count

853514 bp

Genome Length

3757667 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent zn proteaseCSW98_00700Not AvailableNegative153700 - 15446428711.3
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobCSW98_00705Not AvailableNegative154617 - 15558837374.8
carboxy-s-adenosyl-l-methionine synthase cmoaCSW98_00710Not AvailableNegative155591 - 15631927260.6
aspartate--trna ligaseCSW98_00715Not AvailablePositive156591 - 15836365955.1
crossover junction endodeoxyribonuclease ruvcCSW98_00720Not AvailablePositive158541 - 15906218348.4
holliday junction branch migration protein ruvaCSW98_00725Not AvailablePositive159155 - 15977522237.2
holliday junction branch migration dna helicase ruvbCSW98_00730Not AvailablePositive159797 - 16081037705.5
cytochrome d terminal oxidase subunit 1CSW98_00735Not AvailablePositive161308 - 16289158785.7
cytochrome d ubiquinol oxidase subunit iiCSW98_00740Not AvailablePositive162908 - 16404441782.8
cytochrome bd-i oxidase subunit cydxCSW98_00745Not AvailablePositive164059 - 1641483417.17

Displaying genes 261 – 270 of 3472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.