Vibrio sp. HA2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HA2012 is characterized by a single replicon, indicating a relatively simple genomic structure. This bacterium is cataloged under the accession number PFXK00000000.1, which provides a unique identifier for its genetic information within scientific databases. The ecological role of Vibrio species is often significant, as they are commonly found in marine environments and can play important roles in nutrient cycling and ecosystem dynamics. Their presence in coastal waters can also have implications for aquaculture and public health, as some Vibrio species are known to be associated with seafood-borne illnesses. The unique traits of Vibrio sp. HA2012 suggest that it may contribute to the microbial diversity within its habitat, potentially influencing both local ecology and the health of marine organisms. Understanding the genetic and physiological characteristics of Vibrio sp. HA2012 could provide insights into its ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HA2012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HA2012
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HA2012 contig21, whole genome shotgun sequence.

Gene Summary

Adenine Count

1025067 bp

Thymine Count

1027944 bp

Guanine Count

851142 bp

Cytosine Count

853514 bp

Genome Length

3757667 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy-2-butanone-4-phosphate synthaseCSW98_09855Not AvailablePositive2194259 - 219536840339.1
6,7-dimethyl-8-ribityllumazine synthaseCSW98_09860Not AvailablePositive2195498 - 219596816516.9
transcription antitermination factor nusbCSW98_09865Not AvailablePositive2195968 - 219643517611.1
thiamine-phosphate kinaseCSW98_09870Not AvailablePositive2196545 - 219753735903.7
phosphatidylglycerophosphatase aCSW98_09875Not AvailablePositive2197534 - 219802817755.1
peroxiredoxinCSW98_09880Not AvailableNegative2198133 - 219883425797.6
1-deoxy-d-xylulose-5-phosphate synthaseCSW98_09885Not AvailableNegative2199062 - 220094268081.1
(2e,6e)-farnesyl diphosphate synthaseCSW98_09890Not AvailableNegative2200964 - 220184832106.7
exodeoxyribonuclease vii small subunitCSW98_09895Not AvailableNegative2201855 - 22021069269.75
flagellar motor protein pomaCSW98_09900Not AvailablePositive2202402 - 220316627414.0

Displaying genes 2001 – 2010 of 3472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.