Vibrio sp. HA2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HA2012 is characterized by a single replicon, indicating a relatively simple genomic structure. This bacterium is cataloged under the accession number PFXK00000000.1, which provides a unique identifier for its genetic information within scientific databases. The ecological role of Vibrio species is often significant, as they are commonly found in marine environments and can play important roles in nutrient cycling and ecosystem dynamics. Their presence in coastal waters can also have implications for aquaculture and public health, as some Vibrio species are known to be associated with seafood-borne illnesses. The unique traits of Vibrio sp. HA2012 suggest that it may contribute to the microbial diversity within its habitat, potentially influencing both local ecology and the health of marine organisms. Understanding the genetic and physiological characteristics of Vibrio sp. HA2012 could provide insights into its ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HA2012
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HA2012
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HA2012 contig21, whole genome shotgun sequence.

Gene Summary

Adenine Count

1025067 bp

Thymine Count

1027944 bp

Guanine Count

851142 bp

Cytosine Count

853514 bp

Genome Length

3757667 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Protein of unknown function duf5347CSW98_15985Not AvailableNegative3452566 - 345289512572.2
Regulatory protein ciiCSW98_15990Not AvailableNegative3452907 - 345345519861.1
Pyocin activator prtn family proteinCSW98_15995Not AvailableNegative3453686 - 345397010812.0
Putative ci repressorCSW98_16000Not AvailablePositive3454131 - 345501533387.1
hypothetical proteinCSW98_16005Not AvailablePositive3455015 - 345543415914.6
hypothetical proteinCSW98_16010Not AvailablePositive3455719 - 345630622124.1
Site-specific integraseCSW98_16015Not AvailableNegative3456346 - 345741941169.9
AttrNot AvailableNot AvailablePositive3459590 - 3459601Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive3 - 118Not Available
Trna-tyrNot AvailableNot AvailablePositive31 - 115Not Available

Displaying genes 111 – 120 of 3472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.