Thiomonas sp. 13-66-29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Thiomonas

Description

Thiomonas sp. 13-66-29 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This organism has been cataloged under the accession number NCKO00000000.1, which provides a reference for its genetic material in genomic databases. The classification as Gram-negative indicates that Thiomonas sp. 13-66-29 possesses a specific cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature often influences the bacterium's interaction with its environment, including its susceptibility to antibiotics and its ability to survive in various ecological niches. The rod shape of Thiomonas sp. 13-66-29 may confer advantages in motility and nutrient acquisition, allowing it to thrive in diverse habitats. The presence of a single replicon suggests a streamlined genomic organization, which can be advantageous for rapid growth and adaptation to environmental changes. In summary, the traits of Thiomonas sp. 13-66-29—its Gram-negative nature, rod shape, and single replicon—contribute to its ecological versatility and potential roles in biogeochemical processes. Understanding these characteristics can provide insights into how this bacterium interacts within its ecosystem, possibly influencing nutrient cycling and the dynamics of microbial communities.

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Thiomonas sp. 13-66-29 04302015_13_scaffold_4598, whole

Gene Summary

Adenine Count

557020 bp

Thymine Count

554509 bp

Guanine Count

1082246 bp

Cytosine Count

1084995 bp

Genome Length

3278833 bp

Protein-coding Genes

3046 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-diaminopimelate desuccinylaseB7X31_02485Not AvailableNegative504465 - 50561941055.8
type iv pili twitching motility protein piltB7X31_02490Not AvailableNegative505633 - 50678741978.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseB7X31_02495Not AvailableNegative506828 - 50764929567.6
succinyldiaminopimelate transaminaseB7X31_02500Not AvailableNegative507661 - 50884843106.6
rna polymerase sigma factorB7X31_02505Not AvailablePositive509020 - 50961922299.4
hypothetical proteinB7X31_02510Not AvailablePositive509631 - 51005915497.7
hypothetical proteinB7X31_02515Not AvailablePositive510079 - 51033610271.2
lysine decarboxylaseB7X31_02520Not AvailableNegative510517 - 51277584406.7
hypothetical proteinB7X31_02525Not AvailablePositive512876 - 51334916423.7
paraslipinB7X31_02530Not AvailablePositive513417 - 51432232504.3

Displaying genes 491 – 500 of 3094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0008086validoxylamine AC14H25NO8Chemical structure of validoxylamine ANot available
Average335.3502Da
Monoisotopic335.1580168Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.