Thiomonas sp. 13-66-29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Genus

Thiomonas

Description

Thiomonas sp. 13-66-29 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This organism has been cataloged under the accession number NCKO00000000.1, which provides a reference for its genetic material in genomic databases. The classification as Gram-negative indicates that Thiomonas sp. 13-66-29 possesses a specific cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature often influences the bacterium's interaction with its environment, including its susceptibility to antibiotics and its ability to survive in various ecological niches. The rod shape of Thiomonas sp. 13-66-29 may confer advantages in motility and nutrient acquisition, allowing it to thrive in diverse habitats. The presence of a single replicon suggests a streamlined genomic organization, which can be advantageous for rapid growth and adaptation to environmental changes. In summary, the traits of Thiomonas sp. 13-66-29—its Gram-negative nature, rod shape, and single replicon—contribute to its ecological versatility and potential roles in biogeochemical processes. Understanding these characteristics can provide insights into how this bacterium interacts within its ecosystem, possibly influencing nutrient cycling and the dynamics of microbial communities.

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Thiomonas sp. 13-66-29 04302015_13_scaffold_4598, whole

Gene Summary

Adenine Count

557020 bp

Thymine Count

554509 bp

Guanine Count

1082246 bp

Cytosine Count

1084995 bp

Genome Length

3278833 bp

Protein-coding Genes

3046 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseB7X31_14460Not AvailablePositive3040983 - 304196333172.9
hypothetical proteinB7X31_14465Not AvailablePositive3041960 - 304269726677.7
cobalamin-binding proteinB7X31_14470Not AvailableNegative3042707 - 304367234779.5
endonuclease iiiB7X31_14475Not AvailableNegative3043669 - 304431323193.1
hypothetical proteinB7X31_14480Not AvailableNegative3044358 - 304505624844.8
polyhydroxyalkanoate depolymeraseB7X31_14485Not AvailableNegative3045117 - 304639448067.1
hypothetical proteinB7X31_14490Not AvailableNegative3046465 - 304704019598.8
hypothetical proteinB7X31_14495Not AvailableNegative3047037 - 304760620066.7
hypothetical proteinB7X31_14500Not AvailableNegative3047615 - 304886543919.0
hypothetical proteinB7X31_14505Not AvailableNegative3048846 - 304930115896.0

Displaying genes 2841 – 2850 of 3094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0008086validoxylamine AC14H25NO8Chemical structure of validoxylamine ANot available
Average335.3502Da
Monoisotopic335.1580168Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.