Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | gamma proteobacterium symbiont of Ctena orbiculata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: gamma proteobacterium symbiont of Ctena orbiculata isolate
Gene Summary
Adenine Count
974951 bp
Thymine Count
978966 bp
Guanine Count
1306447 bp
Cytosine Count
1328508 bp
Genome Length
4588872 bp
Protein-coding Genes
4090 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | DBO99_00765 | Not Available | Negative | 165481 - 165909 | 16093.7 |
| calcium/sodium antiporter | DBO99_00770 | Not Available | Positive | 166313 - 167281 | 33594.2 |
| d-arabinose 5-phosphate isomerase | DBO99_00775 | Not Available | Positive | 167306 - 168304 | 35154.2 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | DBO99_00780 | Not Available | Positive | 168316 - 168837 | 18949.7 |
| lps export abc transporter periplasmic protein lptc | DBO99_00785 | Not Available | Positive | 168834 - 169397 | 21446.8 |
| lipopolysaccharide transport periplasmic protein lpta | DBO99_00790 | Not Available | Positive | 169411 - 169899 | 18113.9 |
| lps export abc transporter atp-binding protein | DBO99_00795 | Not Available | Positive | 169896 - 170621 | 26601.2 |
| rna polymerase factor sigma-54 | DBO99_00800 | Not Available | Positive | 170817 - 172289 | 54970.1 |
| ribosome-associated translation inhibitor raia | DBO99_00805 | Not Available | Positive | 172462 - 172782 | 12046.4 |
| pts iia-like nitrogen-regulatory protein ptsn | DBO99_00810 | Not Available | Positive | 172812 - 173279 | 17090.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
