gamma proteobacterium symbiont of Ctena orbiculata

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

The gamma proteobacterium symbiont of Ctena orbiculata is characterized by possessing four replicons, which are essential for its genetic stability and functional diversity. The genomic data for this symbiont is represented by multiple accession numbers: QBVF00000000.1, QBVG00000000.1, NATS00000000.1, and NATR00000000.1. These accessions indicate that the symbiont has been sequenced and cataloged, allowing for further analysis of its genetic makeup and potential roles in the host organism. Gamma proteobacteria are known for their versatility and ecological significance. In the context of Ctena orbiculata, a marine bivalve, the symbiotic relationship may play a critical role in nutrient acquisition, metabolic processes, or defense mechanisms against environmental stressors. Such symbioses are common in marine organisms, where microbial partners can enhance the host's capabilities to exploit available resources or adapt to changing conditions. Understanding the specific functions and interactions of the gamma proteobacterium with Ctena orbiculata may provide insights into the evolutionary strategies employed by marine bivalves. This knowledge can also contribute to broader ecological studies regarding the role of microbial symbionts in marine ecosystems, highlighting the importance of such relationships in maintaining the health and resilience of marine organisms.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: gamma proteobacterium symbiont of Ctena orbiculata isolate

Gene Summary

Adenine Count

974951 bp

Thymine Count

978966 bp

Guanine Count

1306447 bp

Cytosine Count

1328508 bp

Genome Length

4588872 bp

Protein-coding Genes

4090 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l13DBO99_00765Not AvailableNegative165481 - 16590916093.7
calcium/sodium antiporterDBO99_00770Not AvailablePositive166313 - 16728133594.2
d-arabinose 5-phosphate isomeraseDBO99_00775Not AvailablePositive167306 - 16830435154.2
3-deoxy-manno-octulosonate-8-phosphatase kdscDBO99_00780Not AvailablePositive168316 - 16883718949.7
lps export abc transporter periplasmic protein lptcDBO99_00785Not AvailablePositive168834 - 16939721446.8
lipopolysaccharide transport periplasmic protein lptaDBO99_00790Not AvailablePositive169411 - 16989918113.9
lps export abc transporter atp-binding proteinDBO99_00795Not AvailablePositive169896 - 17062126601.2
rna polymerase factor sigma-54DBO99_00800Not AvailablePositive170817 - 17228954970.1
ribosome-associated translation inhibitor raiaDBO99_00805Not AvailablePositive172462 - 17278212046.4
pts iia-like nitrogen-regulatory protein ptsnDBO99_00810Not AvailablePositive172812 - 17327917090.5

Displaying genes 161 – 170 of 15681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.