Novosphingobium sp. PC22D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PC22D is a bacterial strain characterized by the presence of flagella, which suggests that it is motile. This motility may aid in its ecological interactions and ability to colonize various environments. The strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with efficient replication and adaptation. The genomic data for Novosphingobium sp. PC22D can be referenced through the accession number MWMO00000000.1. This accession provides a basis for further studies on its genetic makeup and potential metabolic pathways, which might reveal its ecological role in biogeochemical cycles or its interactions with other microorganisms. In summary, Novosphingobium sp. PC22D's motility and genomic characteristics suggest it may play a significant role in its native habitat, potentially participating in the degradation of complex organic compounds or contributing to nutrient cycling. Understanding its specific ecological functions will require additional research on its metabolic capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PC22D
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PC22D contig57, whole genome shotgun sequence.

Gene Summary

Adenine Count

857978 bp

Thymine Count

858885 bp

Guanine Count

1653159 bp

Cytosine Count

1654500 bp

Genome Length

5024522 bp

Protein-coding Genes

4581 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkyl hydroperoxide reductaseB2G71_20390Not AvailableNegative4288110 - 428867320349.8
c-type cytochrome biogenesis protein ccmfB2G71_20395Not AvailableNegative4288670 - 429062869928.8
cytochrome c biogenesis protein ccmeB2G71_20400Not AvailableNegative4290625 - 429109516700.2
heme abc transporter permeaseB2G71_20405Not AvailableNegative4291235 - 429196625847.0
amino acid dehydrogenaseB2G71_20410Not AvailableNegative4292034 - 429309536368.4
Trna-hisNot AvailableNot AvailablePositive4293140 - 4293216Not Available
oxygenaseB2G71_20420Not AvailablePositive4293650 - 429423122235.2
oxygenaseB2G71_20425Not AvailablePositive4294437 - 429502122109.1
crispr-associated protein csn1B2G71_20430Not AvailableNegative4295040 - 429559718711.1
mfs transporterB2G71_20435Not AvailableNegative4295663 - 429710551637.8

Displaying genes 4011 – 4020 of 4648 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.