Novosphingobium sp. PC22D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PC22D is a bacterial strain characterized by the presence of flagella, which suggests that it is motile. This motility may aid in its ecological interactions and ability to colonize various environments. The strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with efficient replication and adaptation. The genomic data for Novosphingobium sp. PC22D can be referenced through the accession number MWMO00000000.1. This accession provides a basis for further studies on its genetic makeup and potential metabolic pathways, which might reveal its ecological role in biogeochemical cycles or its interactions with other microorganisms. In summary, Novosphingobium sp. PC22D's motility and genomic characteristics suggest it may play a significant role in its native habitat, potentially participating in the degradation of complex organic compounds or contributing to nutrient cycling. Understanding its specific ecological functions will require additional research on its metabolic capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PC22D
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PC22D


Gene Summary

Adenine Count

857978 bp

Thymine Count

858885 bp

Guanine Count

1653159 bp

Cytosine Count

1654500 bp

Genome Length

5024522 bp

Protein-coding Genes

4581 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorB2G71_00065Not AvailableNegative14200 - 1482923433.0
serine hydrolaseB2G71_00070Not AvailablePositive14974 - 1695371757.6
dipeptide epimeraseB2G71_00075Not AvailablePositive16964 - 1796535325.4
hypothetical proteinB2G71_00080Not AvailablePositive18241 - 2044277550.8
ebna-1 nuclear proteinB2G71_00085Not AvailablePositive20455 - 2150436535.9
hypothetical proteinB2G71_00090Not AvailablePositive21501 - 2262839897.7
serine hydrolaseB2G71_00095Not AvailablePositive22625 - 2421758080.9
peptidase m19B2G71_00100Not AvailablePositive24214 - 2540143523.5
aspartate aminotransferase family proteinB2G71_00105Not AvailablePositive25719 - 2706847828.6
hypothetical proteinB2G71_00110Not AvailableNegative27121 - 2802932791.4

Displaying genes 31 – 40 of 4648 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.