Novosphingobium sp. PC22D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PC22D is a bacterial strain characterized by the presence of flagella, which suggests that it is motile. This motility may aid in its ecological interactions and ability to colonize various environments. The strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with efficient replication and adaptation. The genomic data for Novosphingobium sp. PC22D can be referenced through the accession number MWMO00000000.1. This accession provides a basis for further studies on its genetic makeup and potential metabolic pathways, which might reveal its ecological role in biogeochemical cycles or its interactions with other microorganisms. In summary, Novosphingobium sp. PC22D's motility and genomic characteristics suggest it may play a significant role in its native habitat, potentially participating in the degradation of complex organic compounds or contributing to nutrient cycling. Understanding its specific ecological functions will require additional research on its metabolic capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PC22D
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PC22D contig57, whole genome shotgun sequence.

Gene Summary

Adenine Count

857978 bp

Thymine Count

858885 bp

Guanine Count

1653159 bp

Cytosine Count

1654500 bp

Genome Length

5024522 bp

Protein-coding Genes

4581 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-hydroxy-6-oxo-2,4-heptadienoate hydrolaseB2G71_19960Not AvailablePositive4201413 - 420226430957.9
catechol 2,3-dioxygenaseB2G71_19965Not AvailablePositive4202284 - 420320734523.5
hypothetical proteinB2G71_19970Not AvailablePositive4203210 - 420364113816.7
2-hydroxymuconic semialdehyde dehydrogenaseB2G71_19975Not AvailablePositive4203681 - 420516552103.9
2-keto-4-pentenoate hydrataseB2G71_19980Not AvailablePositive4205170 - 420596427661.7
acetaldehyde dehydrogenase (acetylating)B2G71_19985Not AvailablePositive4205987 - 420692532834.6
4-hydroxy-2-oxovalerate aldolaseB2G71_19990Not AvailablePositive4206922 - 420795336861.1
4-oxalocrotonate decarboxylaseB2G71_19995Not AvailablePositive4207955 - 420872527389.8
4-oxalocrotonate tautomeraseB2G71_20000Not AvailablePositive4208727 - 42089638319.96
ferredoxinB2G71_20005Not AvailablePositive4208953 - 42092349972.13

Displaying genes 3931 – 3940 of 4648 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.