Novosphingobium sp. PC22D

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PC22D is a bacterial strain characterized by the presence of flagella, which suggests that it is motile. This motility may aid in its ecological interactions and ability to colonize various environments. The strain possesses a single replicon, indicating a streamlined genomic organization that is often associated with efficient replication and adaptation. The genomic data for Novosphingobium sp. PC22D can be referenced through the accession number MWMO00000000.1. This accession provides a basis for further studies on its genetic makeup and potential metabolic pathways, which might reveal its ecological role in biogeochemical cycles or its interactions with other microorganisms. In summary, Novosphingobium sp. PC22D's motility and genomic characteristics suggest it may play a significant role in its native habitat, potentially participating in the degradation of complex organic compounds or contributing to nutrient cycling. Understanding its specific ecological functions will require additional research on its metabolic capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PC22D
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PC22D contig57, whole genome shotgun sequence.

Gene Summary

Adenine Count

857978 bp

Thymine Count

858885 bp

Guanine Count

1653159 bp

Cytosine Count

1654500 bp

Genome Length

5024522 bp

Protein-coding Genes

4581 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit beta'B2G71_00805Not AvailableNegative165448 - 169734158257.0
dna-directed rna polymerase subunit betaB2G71_00810Not AvailableNegative169812 - 173972153631.0
hypothetical proteinB2G71_00815Not AvailablePositive174589 - 17576739864.8
oxidoreductaseB2G71_00820Not AvailableNegative175889 - 17666526455.5
hypothetical proteinB2G71_00825Not AvailablePositive177135 - 17768619951.2
transcriptional regulatorB2G71_00830Not AvailablePositive177686 - 1779439344.27
hypothetical proteinB2G71_00835Not AvailablePositive177940 - 17835314962.9
50s ribosomal protein l10B2G71_00840Not AvailablePositive178645 - 17916017592.2
50s ribosomal protein l7/l12B2G71_00845Not AvailablePositive179227 - 17960712664.1
marr family transcriptional regulatorB2G71_00850Not AvailablePositive179738 - 18070034370.5

Displaying genes 161 – 170 of 4648 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.