Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | subsp. massiliense |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1650369 bp
Thymine Count
1648168 bp
Guanine Count
1925905 bp
Cytosine Count
1905227 bp
Genome Length
7293001 bp
Protein-coding Genes
6226 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase, beta' subunit rpoc | SAMEA4008302_00049 | Not Available | Positive | 50234 - 54193 | 146595.0 |
| uncharacterised protein | SAMEA4008302_00050 | Not Available | Negative | 54278 - 54676 | 14343.8 |
| apc family amino acid-polyamine-organocation transporter | SAMEA4008302_00051 | Not Available | Positive | 54844 - 56247 | 49954.6 |
| protein of uncharacterised function (duf1905) | SAMEA4008302_00052 | Not Available | Negative | 56244 - 56531 | 10324.2 |
| uncharacterised protein | SAMEA4008302_00053 | Not Available | Positive | 56533 - 57420 | 31898.9 |
| activator of hsp90 atpase 1 family protein | SAMEA4008302_00054 | Not Available | Negative | 57417 - 57902 | 18146.2 |
| arsr family transcriptional regulator | SAMEA4008302_00055 | Not Available | Negative | 57906 - 58247 | 12597.9 |
| uncharacterised protein | SAMEA4008302_00056 | Not Available | Negative | 58315 - 59016 | 25647.3 |
| acyl-coa dehydrogenase fade | SAMEA4008302_00057 | Not Available | Positive | 59102 - 60736 | 58768.3 |
| enoyl-coa hydratase/isomerase | SAMEA4008302_00058 | Not Available | Positive | 60739 - 61644 | 33016.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
