Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | subsp. massiliense GD01A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
874586 bp
Thymine Count
877401 bp
Guanine Count
1570122 bp
Cytosine Count
1578925 bp
Genome Length
4901034 bp
Protein-coding Genes
4772 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase ipde1 | EXM25_RS03045 | Not Available | Positive | 609221 - 610363 | 42074.5 |
| (5r,7as)-5-hydroxy-7a-methyl-1-oxo-2,3,5,6,7, 7a-hexahydro-1h-indene-carboxyl-coa reductase | EXM25_RS03050 | Not Available | Positive | 610364 - 611152 | 27501.4 |
| tetr/acrr family transcriptional regulator | EXM25_RS03055 | Not Available | Positive | 611212 - 611859 | 24070.4 |
| steroid 3-ketoacyl-coa thiolase fada6 | EXM25_RS03060 | Not Available | Positive | 611871 - 613019 | 40544.2 |
| hypothetical protein | EXM25_RS03065 | Not Available | Positive | 613045 - 613341 | 10069.0 |
| hypothetical protein | EXM25_RS03070 | Not Available | Negative | 613338 - 613670 | 11431.2 |
| (3as,4s,5r, 7as)-5-hydroxy-7a-methyl-1-oxo-octahydro-1h-indene-4- carboxyl-coa dehydrogenase | EXM25_RS03075 | Not Available | Negative | 613790 - 614863 | 36702.9 |
| coa-transferase subunit beta | EXM25_RS03080 | Not Available | Negative | 614860 - 615609 | 26840.9 |
| cholesterol ring-cleaving hydrolase subunit ipda | EXM25_RS03085 | Not Available | Negative | 615606 - 616487 | 31928.9 |
| (7as)-7a-methyl-1,5-dioxo-2,3,5,6,7, 7a-hexahydro-1h-indene-carboxyl-coa hydrolase | EXM25_RS03090 | Not Available | Negative | 616491 - 617249 | 27026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
