Pseudomonas sp. MF6394

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MF6394 is characterized by possessing a single replicon, which suggests a streamlined genetic architecture conducive to its adaptability and survival in various environments. The genomic data for this strain is cataloged under the accession number MVOJ00000000.1. As a member of the Pseudomonas genus, this microorganism may exhibit traits commonly associated with its relatives, such as metabolic versatility and the ability to thrive in diverse ecological niches. Pseudomonas species are often recognized for their capacity to degrade a wide range of organic compounds, which can play a significant role in bioremediation processes. This metabolic flexibility allows them to utilize various substrates, thereby contributing to nutrient cycling within their ecosystems. Understanding the traits of Pseudomonas sp. MF6394 can provide insights into its potential applications in environmental microbiology, particularly in bioremediation efforts aimed at pollutants. The presence of a single replicon could also indicate a stable genomic structure, which may influence its ecological interactions and adaptability in fluctuating environments. Overall, studying this strain could yield valuable information regarding its ecological roles and potential contributions to biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MF6394
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MF6394
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MF6394 contig088, whole genome shotgun sequence.

Gene Summary

Adenine Count

1404280 bp

Thymine Count

1399463 bp

Guanine Count

2058246 bp

Cytosine Count

2064202 bp

Genome Length

6926191 bp

Protein-coding Genes

6204 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycerate mutase (2,3-diphosphoglycerate-independent)MF6394_09270Not AvailablePositive1892132 - 189365854967.1
peptidase m23MF6394_09275Not AvailablePositive1893918 - 189521347829.8
peptidase s41MF6394_09280Not AvailablePositive1895244 - 189655746306.6
hypothetical proteinMF6394_09285Not AvailablePositive1896560 - 189733328010.2
amino acid abc transporter substrate-binding proteinMF6394_09290Not AvailableNegative1897438 - 189819328159.2
imidazole glycerol phosphate synthase cyclase subunitMF6394_09295Not AvailableNegative1898260 - 189903027102.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseMF6394_09300Not AvailableNegative1899040 - 189977725697.0
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseMF6394_09305Not AvailableNegative1899817 - 190007410076.0
imidazole glycerol phosphate synthase subunit hishMF6394_09310Not AvailableNegative1900075 - 190071323408.9
imidazoleglycerol-phosphate dehydrataseMF6394_09315Not AvailableNegative1900713 - 190130922000.5

Displaying genes 1931 – 1940 of 6374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.