Pseudomonas sp. MF6396

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MF6396 is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number MVOK00000000.1, which provides a reference for researchers seeking genetic and genomic information about this microorganism. Pseudomonas species are well-known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and as plant pathogens or beneficial microbes. This adaptability is likely linked to the genomic features of the specific strain MF6396, which could influence its interactions with other organisms and its environmental resilience. The presence of a single replicon may offer insights into the evolutionary strategies of Pseudomonas sp. MF6396, suggesting a potential for streamlined regulation of gene expression and replication processes. This trait could enhance its survival under fluctuating environmental conditions or in competitive ecosystems. Overall, Pseudomonas sp. MF6396's genetic organization and ecological versatility underscore its potential role in biogeochemical cycles and its applications in biotechnology, particularly in bioremediation and agriculture. Further research into this strain could reveal additional insights into its ecological impact and utility in various biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MF6396
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MF6396
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MF6396 contig102, whole genome shotgun sequence.

Gene Summary

Adenine Count

1084701 bp

Thymine Count

1091922 bp

Guanine Count

1927286 bp

Cytosine Count

1923723 bp

Genome Length

6027632 bp

Protein-coding Genes

5323 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferaseMF6396_21415Not AvailablePositive4634953 - 463724185608.7
protein involved in rimo-mediated beta-methylthiolation of ribosomal protein s12 ycaoMF6396_21420Not AvailableNegative4637341 - 463954582191.3
gtp-binding protein ychfMF6396_21425Not AvailableNegative4639725 - 464082539905.8
aminoacyl-trna hydrolaseMF6396_21430Not AvailableNegative4640847 - 464143120960.2
50s ribosomal protein l25/general stress protein ctcMF6396_21435Not AvailableNegative4641507 - 464210321297.6
ribose-phosphate pyrophosphokinaseMF6396_21440Not AvailableNegative4642242 - 464318334136.2
Trna-glnNot AvailableNot AvailablePositive4643231 - 4643305Not Available
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseMF6396_21450Not AvailableNegative4643340 - 464418830627.1
outer membrane lipoprotein lolbMF6396_21455Not AvailableNegative4644188 - 464480522990.3
hypothetical proteinMF6396_21460Not AvailableNegative4644810 - 464654064126.6

Displaying genes 4281 – 4290 of 5543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.