Pseudomonas sp. MF6396

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MF6396 is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number MVOK00000000.1, which provides a reference for researchers seeking genetic and genomic information about this microorganism. Pseudomonas species are well-known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and as plant pathogens or beneficial microbes. This adaptability is likely linked to the genomic features of the specific strain MF6396, which could influence its interactions with other organisms and its environmental resilience. The presence of a single replicon may offer insights into the evolutionary strategies of Pseudomonas sp. MF6396, suggesting a potential for streamlined regulation of gene expression and replication processes. This trait could enhance its survival under fluctuating environmental conditions or in competitive ecosystems. Overall, Pseudomonas sp. MF6396's genetic organization and ecological versatility underscore its potential role in biogeochemical cycles and its applications in biotechnology, particularly in bioremediation and agriculture. Further research into this strain could reveal additional insights into its ecological impact and utility in various biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MF6396
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MF6396
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MF6396 contig102, whole genome shotgun sequence.

Gene Summary

Adenine Count

1084701 bp

Thymine Count

1091922 bp

Guanine Count

1927286 bp

Cytosine Count

1923723 bp

Genome Length

6027632 bp

Protein-coding Genes

5323 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseMF6396_18425Not AvailablePositive3999150 - 400061052765.3
3,4-dihydroxyphenylacetate 2,3-dioxygenaseMF6396_18430Not AvailablePositive4000730 - 400158731725.9
5-carboxymethyl-2-hydroxymuconate isomeraseMF6396_18435Not AvailablePositive4001607 - 400200214802.8
mfs transporterMF6396_18440Not AvailablePositive4002053 - 400335746930.2
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseMF6396_18445Not AvailablePositive4003370 - 400417328998.8
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolaseMF6396_18450Not AvailablePositive4004189 - 400499227948.9
homoprotocatechuate degradation operon regulator, hparMF6396_18455Not AvailableNegative4005074 - 400549616078.7
fad-dependent oxidoreductaseMF6396_18460Not AvailablePositive4005676 - 400697447719.4
hypothetical proteinMF6396_18465Not AvailablePositive4007010 - 400737513276.8
tetr family transcriptional regulatorMF6396_18470Not AvailableNegative4007453 - 400803721211.4

Displaying genes 3691 – 3700 of 5543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.