Pseudomonas sp. MF6396

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MF6396 is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number MVOK00000000.1, which provides a reference for researchers seeking genetic and genomic information about this microorganism. Pseudomonas species are well-known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and as plant pathogens or beneficial microbes. This adaptability is likely linked to the genomic features of the specific strain MF6396, which could influence its interactions with other organisms and its environmental resilience. The presence of a single replicon may offer insights into the evolutionary strategies of Pseudomonas sp. MF6396, suggesting a potential for streamlined regulation of gene expression and replication processes. This trait could enhance its survival under fluctuating environmental conditions or in competitive ecosystems. Overall, Pseudomonas sp. MF6396's genetic organization and ecological versatility underscore its potential role in biogeochemical cycles and its applications in biotechnology, particularly in bioremediation and agriculture. Further research into this strain could reveal additional insights into its ecological impact and utility in various biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MF6396
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MF6396
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MF6396 contig102, whole genome shotgun sequence.

Gene Summary

Adenine Count

1084701 bp

Thymine Count

1091922 bp

Guanine Count

1927286 bp

Cytosine Count

1923723 bp

Genome Length

6027632 bp

Protein-coding Genes

5323 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseMF6396_05010Not AvailablePositive998670 - 99893010154.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseMF6396_05015Not AvailablePositive998972 - 99970925780.2
imidazole glycerol phosphate synthase cyclase subunitMF6396_05020Not AvailablePositive999720 - 100049027174.5
amino acid abc transporter substrate-binding proteinMF6396_05025Not AvailablePositive1000615 - 100135527737.6
hypothetical proteinMF6396_05030Not AvailablePositive1001451 - 1006091171223.0
hypothetical proteinMF6396_05035Not AvailableNegative1006097 - 100687027678.7
peptidase s41MF6396_05040Not AvailableNegative1006870 - 100818946610.8
peptidase m23MF6396_05045Not AvailableNegative1008279 - 100956547496.4
phosphoglycerate mutase (2,3-diphosphoglycerate-independent)MF6396_05050Not AvailableNegative1009743 - 101127855220.6
sulfurtransferaseMF6396_05055Not AvailablePositive1011493 - 101190914637.0

Displaying genes 1131 – 1140 of 5543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.