Pseudomonas floridensis str. GEV388

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas floridensis str. GEV388 is characterized by having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number MUIO00000000.1, providing a reference point for genetic and taxonomic studies. Pseudomonas species are generally known for their metabolic versatility, which enables them to thrive in various environments. This adaptability may confer ecological advantages, such as the ability to degrade a range of organic compounds, thus playing a significant role in biogeochemical cycles. Given that Pseudomonas floridensis is a member of this genus, it is likely to possess similar metabolic capabilities, contributing to its ecological niche. The presence of a single replicon could suggest streamlined genomic features that may enhance its adaptability and resilience in fluctuating environments. This trait can also influence the strain's response to environmental stresses, such as nutrient availability and competition with other microorganisms. In summary, Pseudomonas floridensis str. GEV388, with its single replicon and metabolic flexibility, exemplifies the ecological roles that Pseudomonas species can play in their habitats, particularly in nutrient cycling and organic matter decomposition. Such traits underscore the importance of this strain in ecological studies and potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas floridensis
StrainGEV388

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas floridensis str. GEV388
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas floridensis strain GEV388 GEV-388_contig_287, whole

Gene Summary

Adenine Count

1246122 bp

Thymine Count

1245769 bp

Guanine Count

1806215 bp

Cytosine Count

1805522 bp

Genome Length

6103707 bp

Protein-coding Genes

5526 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1289 domain-containing proteinBZK31_25205Not AvailablePositive5353571 - 535404118359.2
pp_04988BZK31_25210Not AvailablePositive5354124 - 5354735Not Available
marr family transcriptional regulatorBZK31_25215Not AvailablePositive5354886 - 535537118133.0
hlyd family secretion proteinBZK31_25220Not AvailablePositive5355447 - 535665543019.8
mfs transporterBZK31_25225Not AvailablePositive5356719 - 535825755321.5
udp-2,3-diacylglucosamine diphosphataseBZK31_25230Not AvailableNegative5358336 - 535909728526.5
peptidylprolyl isomeraseBZK31_25235Not AvailableNegative5359094 - 535959718234.6
glutamine--trna ligaseBZK31_25240Not AvailablePositive5359805 - 536149964417.8
cysteine--trna ligaseBZK31_25245Not AvailablePositive5361522 - 536290451451.1
sigma-54-dependent fis family transcriptional regulatorBZK31_25250Not AvailableNegative5362980 - 536481867967.5

Displaying genes 4911 – 4920 of 5644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.