Pseudomonas floridensis str. GEV388

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas floridensis str. GEV388 is characterized by having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number MUIO00000000.1, providing a reference point for genetic and taxonomic studies. Pseudomonas species are generally known for their metabolic versatility, which enables them to thrive in various environments. This adaptability may confer ecological advantages, such as the ability to degrade a range of organic compounds, thus playing a significant role in biogeochemical cycles. Given that Pseudomonas floridensis is a member of this genus, it is likely to possess similar metabolic capabilities, contributing to its ecological niche. The presence of a single replicon could suggest streamlined genomic features that may enhance its adaptability and resilience in fluctuating environments. This trait can also influence the strain's response to environmental stresses, such as nutrient availability and competition with other microorganisms. In summary, Pseudomonas floridensis str. GEV388, with its single replicon and metabolic flexibility, exemplifies the ecological roles that Pseudomonas species can play in their habitats, particularly in nutrient cycling and organic matter decomposition. Such traits underscore the importance of this strain in ecological studies and potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas floridensis
StrainGEV388

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas floridensis str. GEV388
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas floridensis strain GEV388 GEV-388_contig_287, whole

Gene Summary

Adenine Count

1246122 bp

Thymine Count

1245769 bp

Guanine Count

1806215 bp

Cytosine Count

1805522 bp

Genome Length

6103707 bp

Protein-coding Genes

5526 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBZK31_05875Not AvailablePositive1245998 - 124781863915.2
hypothetical proteinBZK31_05880Not AvailablePositive1247934 - 124839217406.9
esteraseBZK31_05885Not AvailableNegative1248394 - 124907424669.6
cytochrome-c oxidase, cbb3-type subunit iBZK31_05890Not AvailablePositive1249349 - 125079453787.1
cytochrome-c oxidase, cbb3-type subunit iiBZK31_05895Not AvailablePositive1250791 - 125139922335.9
cbb3-type cytochrome c oxidase subunit 3BZK31_05900Not AvailablePositive1251405 - 12515876506.93
cytochrome-c oxidase, cbb3-type subunit iiiBZK31_05905Not AvailablePositive1251584 - 125257336070.1
cytochrome c oxidase accessory protein ccogBZK31_05910Not AvailablePositive1252598 - 125401353182.4
hypothetical proteinBZK31_05915Not AvailablePositive1254024 - 125456320005.8
carbonate dehydrataseBZK31_05920Not AvailablePositive1254526 - 125699488783.8

Displaying genes 1171 – 1180 of 5644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.