Coprobacter sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for Coprobacter sp. is accessible under the accession number QAMD00000000.1, which provides a reference for further genetic and functional studies. The classification of Coprobacter sp. as a Gram-negative bacterium suggests that it has a thin peptidoglycan layer surrounded by an outer membrane, which typically contains lipopolysaccharides. This structural feature is significant as it often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its role in microbial communities. Understanding the traits of Coprobacter sp. contributes to our knowledge of microbial diversity and ecology, particularly in relation to its potential roles in biogeochemical cycles and its interactions within the gut microbiome. The presence of such bacteria may influence nutrient cycling, contribute to the breakdown of organic matter, and interact with other microorganisms in their habitats. Further research is necessary to elucidate the specific ecological functions and evolutionary adaptations of Coprobacter sp. within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Coprobacter sp. isolate CIM:MAG 570 contig_61, whole genome

Gene Summary

Adenine Count

938018 bp

Thymine Count

942076 bp

Guanine Count

632379 bp

Cytosine Count

616751 bp

Genome Length

3139957 bp

Protein-coding Genes

2562 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDBY16_00095Not AvailableNegative23448 - 2539173847.0
susc/raga family tonb-linked outer membrane proteinDBY16_00100Not AvailableNegative25397 - 28834126470.0
anti-sigma factorDBY16_00105Not AvailableNegative29004 - 3003839540.4
rna polymerase sigma-70 factorDBY16_00110Not AvailableNegative30092 - 3074225796.1
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive31208 - 31557Not Available
peptidoglycan editing factor pgefDBY16_00115Not AvailableNegative31034 - 3185230291.3
gtpase obgeDBY16_00120Not AvailableNegative31849 - 3297341226.8
adenylate kinaseDBY16_00125Not AvailableNegative33106 - 3367821151.6
hypoxanthine phosphoribosyltransferaseDBY16_00130Not AvailableNegative33721 - 3425720331.8
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseDBY16_00135Not AvailablePositive34601 - 3611554973.2

Displaying genes 21 – 30 of 2620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.