Coprobacter sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for Coprobacter sp. is accessible under the accession number QAMD00000000.1, which provides a reference for further genetic and functional studies. The classification of Coprobacter sp. as a Gram-negative bacterium suggests that it has a thin peptidoglycan layer surrounded by an outer membrane, which typically contains lipopolysaccharides. This structural feature is significant as it often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its role in microbial communities. Understanding the traits of Coprobacter sp. contributes to our knowledge of microbial diversity and ecology, particularly in relation to its potential roles in biogeochemical cycles and its interactions within the gut microbiome. The presence of such bacteria may influence nutrient cycling, contribute to the breakdown of organic matter, and interact with other microorganisms in their habitats. Further research is necessary to elucidate the specific ecological functions and evolutionary adaptations of Coprobacter sp. within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Coprobacter sp. isolate CIM:MAG 570 contig_61, whole genome

Gene Summary

Adenine Count

938018 bp

Thymine Count

942076 bp

Guanine Count

632379 bp

Cytosine Count

616751 bp

Genome Length

3139957 bp

Protein-coding Genes

2562 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDBY16_09120Not AvailableNegative2175044 - 217609940406.7
carbohydrate kinaseDBY16_09125Not AvailableNegative2176204 - 217712734791.1
iron dicitrate transport regulator fecrDBY16_09130Not AvailableNegative2177136 - 217774722060.8
acyl-coa thioester hydrolaseDBY16_09135Not AvailableNegative2177851 - 217828816686.1
duf721 domain-containing proteinDBY16_09140Not AvailableNegative2178296 - 217858611035.6
dna replication and repair protein recfDBY16_09145Not AvailableNegative2178596 - 217968742254.6
hypothetical proteinDBY16_09150Not AvailablePositive2179936 - 218061324920.6
6,7-dimethyl-8-ribityllumazine synthaseDBY16_09155Not AvailablePositive2180707 - 218119817761.2
Trna-tyrNot AvailableNot AvailablePositive2181230 - 2181315Not Available
Trna-glyNot AvailableNot AvailablePositive2181322 - 2181397Not Available

Displaying genes 1801 – 1810 of 2620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.