Coprobacter sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The genomic data for Coprobacter sp. is accessible under the accession number QAMD00000000.1, which provides a reference for further genetic and functional studies. The classification of Coprobacter sp. as a Gram-negative bacterium suggests that it has a thin peptidoglycan layer surrounded by an outer membrane, which typically contains lipopolysaccharides. This structural feature is significant as it often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its role in microbial communities. Understanding the traits of Coprobacter sp. contributes to our knowledge of microbial diversity and ecology, particularly in relation to its potential roles in biogeochemical cycles and its interactions within the gut microbiome. The presence of such bacteria may influence nutrient cycling, contribute to the breakdown of organic matter, and interact with other microorganisms in their habitats. Further research is necessary to elucidate the specific ecological functions and evolutionary adaptations of Coprobacter sp. within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Coprobacter sp. isolate CIM:MAG 570 contig_61, whole genome

Gene Summary

Adenine Count

938018 bp

Thymine Count

942076 bp

Guanine Count

632379 bp

Cytosine Count

616751 bp

Genome Length

3139957 bp

Protein-coding Genes

2562 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent methyltransferaseDBY16_06540Not AvailablePositive1530036 - 153074026464.2
mbl fold metallo-hydrolaseDBY16_06545Not AvailablePositive1530820 - 153162630489.4
Trna-lysNot AvailableNot AvailablePositive1531750 - 1531822Not Available
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseDBY16_06555Not AvailableNegative1532108 - 153288728277.2
multidrug transporterDBY16_06560Not AvailableNegative1532916 - 153429850753.8
hydrophobe/amphiphile efflux-1 family rnd transporterDBY16_06565Not AvailableNegative1534335 - 1537508115427.0
efflux rnd transporter periplasmic adaptor subunitDBY16_06570Not AvailableNegative1537553 - 153875242852.7
crp/fnr family transcriptional regulatorDBY16_06575Not AvailableNegative1538946 - 153951522235.0
susc/raga family proteinDBY16_06580Not AvailablePositive1540715 - 1544044124011.0
ragb/susd family nutrient uptake outer membrane proteinDBY16_06585Not AvailablePositive1544063 - 154569762133.8

Displaying genes 1291 – 1300 of 2620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.