Hoeflea sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Hoeflea

Description

Hoeflea sp. is characterized by having a single replicon, which indicates a simplistic genomic structure. The organism is cataloged under the accession number PANK00000000.1, which serves as a reference for its genetic data. While specific metabolic capabilities, habitat preferences, and ecological roles of Hoeflea sp. are not detailed in the provided information, the presence of a single replicon may suggest a streamlined genome that could be advantageous in particular environments. Many bacteria with such genomic simplicity are often adapted to specific ecological niches, potentially influencing their interactions within microbial communities. The ecological significance of Hoeflea sp. might lie in its ability to thrive in specialized environments, potentially contributing to nutrient cycling or interactions with other microorganisms. Further research and exploration could elucidate the specific roles Hoeflea sp. plays in its ecosystem, but the current data suggests a focus on a streamlined genetic framework that could facilitate adaptation to particular ecological conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusHoeflea
SpeciesHoeflea sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Hoeflea sp. isolate SAT27 MHASMcontig_1725972, whole genome

Gene Summary

Adenine Count

841006 bp

Thymine Count

832245 bp

Guanine Count

1314574 bp

Cytosine Count

1308946 bp

Genome Length

4324183 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseCME90_15235Not AvailableNegative3178354 - 317977848202.3
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseCME90_15240Not AvailableNegative3179775 - 318137355622.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseCME90_15245Not AvailableNegative3181370 - 318283949576.8
cell division proteinCME90_15250Not AvailableNegative3182897 - 318463362129.0
hypothetical proteinCME90_15255Not AvailableNegative3184630 - 318499213322.0
s-adenosyl-methyltransferaseCME90_15260Not AvailableNegative3184998 - 318651553516.4
aldo/keto reductaseCME90_15265Not AvailableNegative3186943 - 318803439058.6
lysr family transcriptional regulatorCME90_15270Not AvailablePositive3188146 - 318903932529.8
membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate familyCME90_15285Not AvailablePositive3190241 - 319229871457.5
murein transglycosylaseCME90_15290Not AvailableNegative3192404 - 319291617751.5

Displaying genes 3011 – 3020 of 4077 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.