Dyella sp. AtDHG13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. AtDHG13 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This classification places it within the diverse family of bacteria known for their thin peptidoglycan layer and outer membrane, which can influence various biological interactions and environmental adaptations. The genome of Dyella sp. AtDHG13 is documented under the accession number QICJ00000000.1, indicating its availability for further genomic studies and analyses. The singular replicon suggests a relatively streamlined genetic organization, which could be advantageous for rapid replication and adaptability in various environments. Ecologically, members of the Dyella genus are often associated with soil and plant environments, where they may play roles in nutrient cycling and plant growth promotion. The Gram-negative nature of Dyella sp. AtDHG13 may also imply potential interactions with other microbial communities, possibly influencing soil health and ecosystem dynamics. Understanding the specific capabilities and interactions of Dyella sp. AtDHG13 can provide insights into its ecological relevance and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. AtDHG13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. AtDHG13 Ga0060192_132, whole genome shotgun sequence.

Gene Summary

Adenine Count

873795 bp

Thymine Count

871007 bp

Guanine Count

1667416 bp

Cytosine Count

1683077 bp

Genome Length

5095498 bp

Protein-coding Genes

4480 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multidrug efflux pumpBDW41_101562Not AvailablePositive642744 - 646034116802.0
nodt family efflux transporter outer membrane factor (omf) lipoproteinBDW41_101563Not AvailablePositive646031 - 64750051518.2
putative oxidoreductaseBDW41_101564Not AvailablePositive648216 - 64909732837.2
5'-nucleotidaseBDW41_101565Not AvailableNegative649107 - 65003633383.5
nad+ kinaseBDW41_101566Not AvailableNegative650267 - 65102828404.2
hypothetical proteinBDW41_101567Not AvailablePositive651577 - 65204115485.2
glutamate dehydrogenase (nad)BDW41_101568Not AvailableNegative652143 - 657074183178.0
membrane fusion protein (multidrug efflux system)BDW41_101569Not AvailablePositive657923 - 65912841961.6
multidrug efflux pumpBDW41_101570Not AvailablePositive659143 - 662397116006.0
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinBDW41_101571Not AvailableNegative662492 - 66343635871.5

Displaying genes 621 – 630 of 4578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.