Dyella sp. AtDHG13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. AtDHG13 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This classification places it within the diverse family of bacteria known for their thin peptidoglycan layer and outer membrane, which can influence various biological interactions and environmental adaptations. The genome of Dyella sp. AtDHG13 is documented under the accession number QICJ00000000.1, indicating its availability for further genomic studies and analyses. The singular replicon suggests a relatively streamlined genetic organization, which could be advantageous for rapid replication and adaptability in various environments. Ecologically, members of the Dyella genus are often associated with soil and plant environments, where they may play roles in nutrient cycling and plant growth promotion. The Gram-negative nature of Dyella sp. AtDHG13 may also imply potential interactions with other microbial communities, possibly influencing soil health and ecosystem dynamics. Understanding the specific capabilities and interactions of Dyella sp. AtDHG13 can provide insights into its ecological relevance and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. AtDHG13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. AtDHG13 Ga0060192_132, whole genome shotgun sequence.

Gene Summary

Adenine Count

873795 bp

Thymine Count

871007 bp

Guanine Count

1667416 bp

Cytosine Count

1683077 bp

Genome Length

5095498 bp

Protein-coding Genes

4480 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-subunit dehydrogenaseBDW41_11561Not AvailableNegative4563556 - 456426024225.0
hxlr family transcriptional regulatorBDW41_11562Not AvailablePositive4564446 - 456497320012.1
membrane fusion protein (multidrug efflux system)BDW41_11563Not AvailablePositive4564970 - 456607339199.4
dha2 family multidrug resistance proteinBDW41_11564Not AvailablePositive4566070 - 456766857435.4
nodt family efflux transporter outer membrane factor (omf) lipoproteinBDW41_11565Not AvailablePositive4567695 - 456921253788.4
mono/diheme cytochrome c family proteinBDW41_11566Not AvailableNegative4569223 - 457066551007.2
gluconate 2-dehydrogenase alpha chainBDW41_11567Not AvailableNegative4570662 - 457243765148.2
gluconate 2-dehydrogenase gamma chainBDW41_11568Not AvailableNegative4572434 - 457315926267.9
arginine:agmatine antiporter (apa family)BDW41_11569Not AvailablePositive4573646 - 457498947162.1
arginine decarboxylaseBDW41_11570Not AvailablePositive4575032 - 457733285092.7

Displaying genes 4121 – 4130 of 4578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.