Dyella sp. AtDHG13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. AtDHG13 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This classification places it within the diverse family of bacteria known for their thin peptidoglycan layer and outer membrane, which can influence various biological interactions and environmental adaptations. The genome of Dyella sp. AtDHG13 is documented under the accession number QICJ00000000.1, indicating its availability for further genomic studies and analyses. The singular replicon suggests a relatively streamlined genetic organization, which could be advantageous for rapid replication and adaptability in various environments. Ecologically, members of the Dyella genus are often associated with soil and plant environments, where they may play roles in nutrient cycling and plant growth promotion. The Gram-negative nature of Dyella sp. AtDHG13 may also imply potential interactions with other microbial communities, possibly influencing soil health and ecosystem dynamics. Understanding the specific capabilities and interactions of Dyella sp. AtDHG13 can provide insights into its ecological relevance and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. AtDHG13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. AtDHG13 Ga0060192_132, whole genome shotgun sequence.

Gene Summary

Adenine Count

873795 bp

Thymine Count

871007 bp

Guanine Count

1667416 bp

Cytosine Count

1683077 bp

Genome Length

5095498 bp

Protein-coding Genes

4480 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protease ftsh catalytic subunitBDW41_101202Not AvailableNegative231057 - 23300670336.5
23s rrna um-2552 2'-o-methyltransferaseBDW41_101203Not AvailableNegative233003 - 23365324182.2
rna-binding proteinBDW41_101204Not AvailablePositive233738 - 23403410882.1
uncharacterized proteinBDW41_101205Not AvailablePositive234051 - 23443113802.7
murein dd-endopeptidase mepm/ murein hydrolase activator nlpdBDW41_101206Not AvailableNegative234503 - 23552234560.8
membrane protein yqaa with snare-associated domainBDW41_101207Not AvailableNegative235564 - 23617222794.1
protein-l-isoaspartate(d-aspartate) o-methyltransferaseBDW41_101208Not AvailableNegative236195 - 23687524729.8
5'-nucleotidase /3'-nucleotidase /exopolyphosphataseBDW41_101209Not AvailableNegative236880 - 23767428222.6
dna-nicking smr family endonucleaseBDW41_101210Not AvailablePositive237858 - 23840319653.9
trud family trna pseudouridine synthaseBDW41_101211Not AvailableNegative239754 - 24077037383.3

Displaying genes 261 – 270 of 4578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.