Dyella sp. AtDHG13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. AtDHG13 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This classification places it within the diverse family of bacteria known for their thin peptidoglycan layer and outer membrane, which can influence various biological interactions and environmental adaptations. The genome of Dyella sp. AtDHG13 is documented under the accession number QICJ00000000.1, indicating its availability for further genomic studies and analyses. The singular replicon suggests a relatively streamlined genetic organization, which could be advantageous for rapid replication and adaptability in various environments. Ecologically, members of the Dyella genus are often associated with soil and plant environments, where they may play roles in nutrient cycling and plant growth promotion. The Gram-negative nature of Dyella sp. AtDHG13 may also imply potential interactions with other microbial communities, possibly influencing soil health and ecosystem dynamics. Understanding the specific capabilities and interactions of Dyella sp. AtDHG13 can provide insights into its ecological relevance and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. AtDHG13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. AtDHG13 Ga0060192_132, whole genome shotgun sequence.

Gene Summary

Adenine Count

873795 bp

Thymine Count

871007 bp

Guanine Count

1667416 bp

Cytosine Count

1683077 bp

Genome Length

5095498 bp

Protein-coding Genes

4480 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan biosynthesis/recognition proteinBDW41_105144Not AvailableNegative2362057 - 236311540091.5
acyl carrier proteinBDW41_105145Not AvailablePositive2363350 - 23636019290.83
3-oxoacyl-[acyl-carrier-protein] synthase iiBDW41_105146Not AvailablePositive2363605 - 236481942192.5
8-oxo-dgtp diphosphataseBDW41_105147Not AvailableNegative2365553 - 236596314882.8
8-oxo-dgtp diphosphataseBDW41_105148Not AvailableNegative2365960 - 236644818497.2
uncharacterized protein yige (duf2233 family)BDW41_105149Not AvailablePositive2366573 - 236738829766.6
penicillin amidaseBDW41_105150Not AvailablePositive2367441 - 236986187495.6
succinyldiaminopimelate desuccinylaseBDW41_105151Not AvailableNegative2370034 - 237116740478.1
vit1/ccc1 family predicted fe2+/mn2+ transporterBDW41_105152Not AvailableNegative2371221 - 237228837795.4
spx/mgsr family transcriptional regulatorBDW41_105153Not AvailableNegative2372290 - 237264613422.1

Displaying genes 2141 – 2150 of 4578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.