Dyella sp. AtDHG13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. AtDHG13 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This classification places it within the diverse family of bacteria known for their thin peptidoglycan layer and outer membrane, which can influence various biological interactions and environmental adaptations. The genome of Dyella sp. AtDHG13 is documented under the accession number QICJ00000000.1, indicating its availability for further genomic studies and analyses. The singular replicon suggests a relatively streamlined genetic organization, which could be advantageous for rapid replication and adaptability in various environments. Ecologically, members of the Dyella genus are often associated with soil and plant environments, where they may play roles in nutrient cycling and plant growth promotion. The Gram-negative nature of Dyella sp. AtDHG13 may also imply potential interactions with other microbial communities, possibly influencing soil health and ecosystem dynamics. Understanding the specific capabilities and interactions of Dyella sp. AtDHG13 can provide insights into its ecological relevance and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. AtDHG13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. AtDHG13 Ga0060192_132, whole genome shotgun sequence.

Gene Summary

Adenine Count

873795 bp

Thymine Count

871007 bp

Guanine Count

1667416 bp

Cytosine Count

1683077 bp

Genome Length

5095498 bp

Protein-coding Genes

4480 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar porter (sp) family mfs transporterBDW41_104150Not AvailableNegative2030389 - 203182850133.8
pseudouridine synthaseBDW41_104151Not AvailableNegative2032396 - 203311526682.6
abc-2 type transport system permease proteinBDW41_104152Not AvailableNegative2033206 - 203397927988.4
abc-2 type transport system atp-binding proteinBDW41_104153Not AvailableNegative2033976 - 203494435632.2
ferredoxin-nadp reductaseBDW41_104154Not AvailablePositive2035041 - 203578427065.3
hypothetical proteinBDW41_104155Not AvailablePositive2036048 - 203641312307.4
type 1 fimbria pilinBDW41_104156Not AvailableNegative2036463 - 203741631902.8
outer membrane usher proteinBDW41_104157Not AvailableNegative2037413 - 204012795626.1
chaperone protein ecpdBDW41_104158Not AvailableNegative2040178 - 204091826429.7
major type 1 subunit fimbrin (pilin)BDW41_104159Not AvailableNegative2041003 - 204153017219.3

Displaying genes 1841 – 1850 of 4578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.