Dyella sp. AtDHG13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. AtDHG13 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This classification places it within the diverse family of bacteria known for their thin peptidoglycan layer and outer membrane, which can influence various biological interactions and environmental adaptations. The genome of Dyella sp. AtDHG13 is documented under the accession number QICJ00000000.1, indicating its availability for further genomic studies and analyses. The singular replicon suggests a relatively streamlined genetic organization, which could be advantageous for rapid replication and adaptability in various environments. Ecologically, members of the Dyella genus are often associated with soil and plant environments, where they may play roles in nutrient cycling and plant growth promotion. The Gram-negative nature of Dyella sp. AtDHG13 may also imply potential interactions with other microbial communities, possibly influencing soil health and ecosystem dynamics. Understanding the specific capabilities and interactions of Dyella sp. AtDHG13 can provide insights into its ecological relevance and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. AtDHG13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. AtDHG13 Ga0060192_132, whole genome shotgun sequence.

Gene Summary

Adenine Count

873795 bp

Thymine Count

871007 bp

Guanine Count

1667416 bp

Cytosine Count

1683077 bp

Genome Length

5095498 bp

Protein-coding Genes

4480 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseBDW41_103103Not AvailableNegative1456990 - 145825545507.5
transglutaminase superfamily proteinBDW41_103104Not AvailableNegative1458323 - 145987057555.9
putative membrane proteinBDW41_103105Not AvailablePositive1459989 - 146114041052.5
nlpc/p60 family proteinBDW41_103106Not AvailablePositive1461149 - 146255251283.3
o-succinylbenzoate synthaseBDW41_103107Not AvailablePositive1462603 - 146370039691.4
rpir family transcriptional regulatorBDW41_103108Not AvailablePositive1463702 - 146455931129.2
l,d-peptidoglycan transpeptidase ykud (erfk/ybis/ycfs/ynhg family)BDW41_103109Not AvailablePositive1464581 - 146536628246.5
na+/h+-dicarboxylate symporterBDW41_103110Not AvailablePositive1465363 - 146661042794.4
d-arginine dehydrogenaseBDW41_103111Not AvailablePositive1466607 - 146774340506.3
hypothetical proteinBDW41_103112Not AvailableNegative1467829 - 146818513408.4

Displaying genes 1321 – 1330 of 4578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.