Polynucleobacter brandtiae

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter brandtiae is a rod-shaped bacterium characterized by possessing a single replicon. This trait indicates a streamlined genomic organization, which may contribute to its efficiency in replication and adaptation within its ecological niche. The taxonomic classification of Polynucleobacter brandtiae is supported by its genetic material, with a reference accession number of PGTX00000000.1 available for further genomic studies. As a member of the Polynucleobacter genus, this bacterium is likely involved in freshwater ecosystems, where it plays a role in nutrient cycling and microbial diversity. The rod shape of Polynucleobacter brandtiae suggests that it may be well-adapted for movement in aquatic environments, potentially facilitating its interactions with other microorganisms and organic matter. The presence of Polynucleobacter species in freshwater habitats often correlates with specific environmental conditions, such as organic carbon availability and microbial community composition. Understanding the traits of Polynucleobacter brandtiae, including its morphology and genetic structure, can provide insights into its ecological functions and contributions to freshwater microbial dynamics. Its single-replicon feature may reflect adaptations that optimize its survival and growth in fluctuating environments, highlighting the importance of genomic organization in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter brandtiae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter brandtiae strain UB-Domo-W1 Ga0139088_119, whole

Gene Summary

Adenine Count

552843 bp

Thymine Count

537273 bp

Guanine Count

437881 bp

Cytosine Count

474345 bp

Genome Length

2002342 bp

Protein-coding Genes

1994 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-binding factor aB0G85_1938Not AvailableNegative1840806 - 184118013989.8
translation initiation factor 2 (bif-2)B0G85_1939Not AvailableNegative1841195 - 184401799923.0
nusa antitermination factorB0G85_1940Not AvailableNegative1844031 - 184551255577.0
ribosome maturation factor rimpB0G85_1941Not AvailableNegative1845509 - 184600018028.5
ribosomal large subunit pseudouridine synthase bB0G85_1942Not AvailableNegative1846174 - 184799165636.4
condensin subunit scpbB0G85_1943Not AvailableNegative1847998 - 184876228373.9
nte family proteinB0G85_1944Not AvailablePositive1848879 - 184988034931.5
cell wall-associated nlpc family hydrolaseB0G85_1945Not AvailableNegative1849886 - 185052423678.4
microcin c transport system atp-binding proteinB0G85_1946Not AvailableNegative1850691 - 185234660555.1
microcin c transport system permease proteinB0G85_1947Not AvailableNegative1852343 - 185336838236.8

Displaying genes 1911 – 1920 of 2041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.