Saccharothrix sp. ALI-22-I

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix sp. ALI-22-I is a microbial strain characterized by its unique genomic architecture, specifically possessing a single replicon, which may influence its genetic stability and adaptability. The genomic information for this strain is cataloged under the accession number MTQP00000000.1. This single replicon structure can often be associated with streamlined metabolic processes, potentially allowing for efficient resource utilization in its environment. As a member of the genus Saccharothrix, this strain is likely to exhibit traits common to its relatives, such as the production of secondary metabolites that could have ecological roles or applications in biotechnology. The ecological significance of Saccharothrix species is often linked to their ability to thrive in diverse environments, contributing to biogeochemical cycles and possibly interacting with other microorganisms. The specific traits and genomic features of Saccharothrix sp. ALI-22-I suggest that it may play a role in its habitat's microbiome, contributing to nutrient cycling or interacting with plant roots. Understanding these traits can provide insights into the ecological niches occupied by this strain and its potential applications in fields such as agriculture or bioremediation. Further research into this strain could reveal novel biochemical pathways or compounds that could be beneficial for industrial applications or environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix sp. ALI-22-I
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix sp. ALI-22-I Contig73, whole genome shotgun

Gene Summary

Adenine Count

1540858 bp

Thymine Count

1534760 bp

Guanine Count

3611802 bp

Cytosine Count

3612639 bp

Genome Length

10300059 bp

Protein-coding Genes

8667 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-dehydro-4-deoxyglucarate dehydrataseALI22I_42750Not AvailablePositive9293530 - 929443532153.4
glucarate dehydrataseALI22I_42755Not AvailablePositive9294460 - 929578547659.8
mandelate racemase/muconate lactonizing proteinALI22I_42760Not AvailablePositive9295835 - 929699842248.3
hypothetical proteinALI22I_42765Not AvailablePositive9297081 - 929801031603.1
repressor lexaALI22I_42770Not AvailablePositive9298094 - 929875623915.3
dna-binding response regulatorALI22I_42775Not AvailableNegative9298773 - 929944423842.0
two-component sensor histidine kinaseALI22I_42780Not AvailableNegative9299441 - 930075745944.6
hypothetical proteinALI22I_42785Not AvailableNegative9300963 - 930179928219.8
multidrug abc transporter atp-binding proteinALI22I_42790Not AvailableNegative9301799 - 930273132817.4
sodium abc transporter permeaseALI22I_42795Not AvailableNegative9302880 - 930398337960.4

Displaying genes 8011 – 8020 of 8817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.