Saccharothrix sp. ALI-22-I

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix sp. ALI-22-I is a microbial strain characterized by its unique genomic architecture, specifically possessing a single replicon, which may influence its genetic stability and adaptability. The genomic information for this strain is cataloged under the accession number MTQP00000000.1. This single replicon structure can often be associated with streamlined metabolic processes, potentially allowing for efficient resource utilization in its environment. As a member of the genus Saccharothrix, this strain is likely to exhibit traits common to its relatives, such as the production of secondary metabolites that could have ecological roles or applications in biotechnology. The ecological significance of Saccharothrix species is often linked to their ability to thrive in diverse environments, contributing to biogeochemical cycles and possibly interacting with other microorganisms. The specific traits and genomic features of Saccharothrix sp. ALI-22-I suggest that it may play a role in its habitat's microbiome, contributing to nutrient cycling or interacting with plant roots. Understanding these traits can provide insights into the ecological niches occupied by this strain and its potential applications in fields such as agriculture or bioremediation. Further research into this strain could reveal novel biochemical pathways or compounds that could be beneficial for industrial applications or environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix sp. ALI-22-I
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix sp. ALI-22-I Contig73, whole genome shotgun

Gene Summary

Adenine Count

1540858 bp

Thymine Count

1534760 bp

Guanine Count

3611802 bp

Cytosine Count

3612639 bp

Genome Length

10300059 bp

Protein-coding Genes

8667 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coenzyme a pyrophosphataseALI22I_37495Not AvailableNegative8251144 - 825181523469.9
alkyl hydroperoxide reductaseALI22I_37500Not AvailableNegative8251812 - 825242621309.8
endonuclease iiiALI22I_37505Not AvailableNegative8252423 - 825319028164.1
hypothetical proteinALI22I_37510Not AvailablePositive8253412 - 82536639853.15
crp/fnr family transcriptional regulatorALI22I_37515Not AvailablePositive8253865 - 825453924799.9
mfs transporterALI22I_37520Not AvailablePositive8255034 - 825627241547.9
dna polymerase iii subunit betaALI22I_37525Not AvailablePositive8256342 - 825744838789.3
mbl fold metallo-hydrolaseALI22I_37530Not AvailableNegative8257494 - 825826726623.8
nudix hydrolaseALI22I_37535Not AvailableNegative8258264 - 825906728185.6
hypothetical proteinALI22I_37540Not AvailablePositive8259143 - 825949012333.7

Displaying genes 6991 – 7000 of 8817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.