Saccharothrix sp. ALI-22-I

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix sp. ALI-22-I is a microbial strain characterized by its unique genomic architecture, specifically possessing a single replicon, which may influence its genetic stability and adaptability. The genomic information for this strain is cataloged under the accession number MTQP00000000.1. This single replicon structure can often be associated with streamlined metabolic processes, potentially allowing for efficient resource utilization in its environment. As a member of the genus Saccharothrix, this strain is likely to exhibit traits common to its relatives, such as the production of secondary metabolites that could have ecological roles or applications in biotechnology. The ecological significance of Saccharothrix species is often linked to their ability to thrive in diverse environments, contributing to biogeochemical cycles and possibly interacting with other microorganisms. The specific traits and genomic features of Saccharothrix sp. ALI-22-I suggest that it may play a role in its habitat's microbiome, contributing to nutrient cycling or interacting with plant roots. Understanding these traits can provide insights into the ecological niches occupied by this strain and its potential applications in fields such as agriculture or bioremediation. Further research into this strain could reveal novel biochemical pathways or compounds that could be beneficial for industrial applications or environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix sp. ALI-22-I
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix sp. ALI-22-I Contig73, whole genome shotgun

Gene Summary

Adenine Count

1540858 bp

Thymine Count

1534760 bp

Guanine Count

3611802 bp

Cytosine Count

3612639 bp

Genome Length

10300059 bp

Protein-coding Genes

8667 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorALI22I_11840Not AvailableNegative2634458 - 263679782322.2
molecular chaperone-like proteinALI22I_11845Not AvailableNegative2636821 - 263809244024.6
hypothetical proteinALI22I_11850Not AvailablePositive2638337 - 263928430219.1
gtp-binding proteinALI22I_11855Not AvailablePositive2639405 - 264121665855.8
hypothetical proteinALI22I_11860Not AvailablePositive2641288 - 264266149634.4
lysr family transcriptional regulatorALI22I_11865Not AvailableNegative2642687 - 264350229017.1
phenazine biosynthesis protein phzfALI22I_11870Not AvailablePositive2643579 - 264443330239.4
nitroreductaseALI22I_11875Not AvailableNegative2644430 - 264485515904.5
hypothetical proteinALI22I_11880Not AvailablePositive2645136 - 264619738126.0
peptidase c14, caspase catalytic subunit p20ALI22I_11885Not AvailablePositive2646297 - 264687519172.7

Displaying genes 2121 – 2130 of 8817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.