Sphingobacterium sp. B29

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium sp. B29 is characterized by its rod-shaped morphology and possesses a single replicon, which is indicative of its genomic organization. The genomic information for this bacterium is cataloged under the accession number NZ_CP019158.1. Sphingobacterium species are generally known for their role in various ecological niches, particularly in soil and aquatic environments. They are often associated with the degradation of complex organic compounds, contributing to nutrient cycling within their ecosystems. The presence of Sphingobacterium sp. B29 may indicate its potential utility in bioremediation processes or in the breakdown of pollutants, although specific metabolic capabilities of this strain are not detailed in the provided data. The rod shape of Sphingobacterium sp. B29 may confer certain advantages in terms of motility and surface area-to-volume ratio, which can be important for nutrient uptake and interaction with the surrounding environment. Understanding the specific ecological roles and interactions of Sphingobacterium sp. B29 requires further investigation, particularly in terms of its metabolic pathways and capabilities. Such insights could elucidate its function in its native habitat and potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. B29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp. B29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium sp. B29 chromosome, complete genome.

Gene Summary

Adenine Count

1909032 bp

Thymine Count

1908389 bp

Guanine Count

1271939 bp

Cytosine Count

1267825 bp

Genome Length

6357185 bp

Protein-coding Genes

5325 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinBV902_RS25275Not AvailablePositive5872290 - 587391261377.0
mbl fold metallo-hydrolaseBV902_RS25280Not AvailableNegative5873961 - 587474329497.6
single-stranded-dna-specific exonuclease recjBV902_RS25285Not AvailablePositive5874858 - 587655863562.4
lps export abc transporter atp-binding proteinBV902_RS25290Not AvailablePositive5876714 - 587744827701.7
gh3 auxin-responsive promoter family proteinBV902_RS25295Not AvailablePositive5877471 - 587898558628.5
hypothetical proteinBV902_RS27500Not AvailableNegative5879177 - 58793355834.1
branched-chain amino acid aminotransferaseBV902_RS25300Not AvailablePositive5879660 - 588073039973.2
trna (adenosine(37)-n6)-dimethylallyltransferase miaaBV902_RS25305Not AvailableNegative5880876 - 588179634654.7
is1096 element passenger tnpr family proteinBV902_RS25310Not AvailableNegative5881843 - 588243623118.0
cca trna nucleotidyltransferaseBV902_RS25315Not AvailableNegative5882482 - 588391554708.5

Displaying genes 5061 – 5070 of 5422 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.