Sphingobacterium sp. B29

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium sp. B29 is characterized by its rod-shaped morphology and possesses a single replicon, which is indicative of its genomic organization. The genomic information for this bacterium is cataloged under the accession number NZ_CP019158.1. Sphingobacterium species are generally known for their role in various ecological niches, particularly in soil and aquatic environments. They are often associated with the degradation of complex organic compounds, contributing to nutrient cycling within their ecosystems. The presence of Sphingobacterium sp. B29 may indicate its potential utility in bioremediation processes or in the breakdown of pollutants, although specific metabolic capabilities of this strain are not detailed in the provided data. The rod shape of Sphingobacterium sp. B29 may confer certain advantages in terms of motility and surface area-to-volume ratio, which can be important for nutrient uptake and interaction with the surrounding environment. Understanding the specific ecological roles and interactions of Sphingobacterium sp. B29 requires further investigation, particularly in terms of its metabolic pathways and capabilities. Such insights could elucidate its function in its native habitat and potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. B29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp. B29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium sp. B29 chromosome, complete genome.

Gene Summary

Adenine Count

1909032 bp

Thymine Count

1908389 bp

Guanine Count

1271939 bp

Cytosine Count

1267825 bp

Genome Length

6357185 bp

Protein-coding Genes

5325 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseBV902_RS20185Not AvailableNegative4671726 - 467255329406.3
glycine betaine/l-proline abc transporter atp-binding proteinBV902_RS20190Not AvailableNegative4672556 - 467379746001.9
ragb/susd family nutrient uptake outer membrane proteinBV902_RS20195Not AvailableNegative4674279 - 467602165661.0
susc/raga family tonb-linked outer membrane proteinBV902_RS20200Not AvailableNegative4676026 - 4679292121235.0
spl family radical sam proteinBV902_RS20205Not AvailableNegative4679974 - 468087334022.2
sdr family nad(p)-dependent oxidoreductaseBV902_RS20210Not AvailablePositive4681087 - 468192930860.5
helix-turn-helix domain-containing proteinBV902_RS20215Not AvailablePositive4682000 - 468293535662.9
cold-shock proteinBV902_RS20220Not AvailablePositive4683031 - 468387032329.7
sdr family oxidoreductaseBV902_RS20225Not AvailableNegative4684037 - 468478626673.8
winged helix-turn-helix transcriptional regulatorBV902_RS20230Not AvailablePositive4684865 - 468520613353.3

Displaying genes 4031 – 4040 of 5422 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.