Sphingomonadaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

The Sphingomonadaceae bacterium is characterized by having a total of five replicons, which indicates a complex genomic structure that may contribute to its adaptability and metabolic versatility. The specific accessions associated with this bacterium are NZAR00000000.1, NZMZ00000000.1, NZDO00000000.1, NYUG00000000.1, and PBLE00000000.1. These accessions are unique identifiers for genomic sequences that provide valuable information regarding its classification and phylogenetic relationships within the Sphingomonadaceae family. This bacterium belongs to a family known for its diverse metabolic capabilities, often involving the degradation of complex organic compounds, which is significant in various ecological contexts, including bioremediation processes. The presence of multiple replicons can be advantageous for the bacterium, as it may allow for the regulation of different sets of genes, potentially enhancing its ability to thrive in varied environments or respond to environmental stresses. Understanding the genomic architecture and ecological roles of Sphingomonadaceae bacteria can provide insights into their potential applications in environmental microbiology, particularly in the degradation of pollutants and the maintenance of ecosystem health. This bacterium exemplifies the complexity and utility of microbial life in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium isolate SP246 151611, whole

Gene Summary

Adenine Count

546419 bp

Thymine Count

551694 bp

Guanine Count

913631 bp

Cytosine Count

917666 bp

Genome Length

2948989 bp

Protein-coding Genes

2688 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box proteinCMN67_05885Not AvailablePositive1244658 - 124618455929.0
hypothetical proteinCMN67_05890Not AvailablePositive1246254 - 124671216358.5
abc transporter atp-binding proteinCMN67_05895Not AvailablePositive1246730 - 124747626301.9
abc transporter permeaseCMN67_05900Not AvailablePositive1247473 - 124901754340.0
methyltransferaseCMN67_05905Not AvailableNegative1249014 - 125003335689.8
prolipoprotein diacylglyceryl transferaseCMN67_05910Not AvailableNegative1250105 - 125097132126.8
amp-dependent synthetaseCMN67_05915Not AvailablePositive1251135 - 125282961176.2
[protein-pii] uridylyltransferaseCMN67_05920Not AvailablePositive1252826 - 1255585103608.0
yggs family pyridoxal phosphate-dependent enzymeCMN67_05925Not AvailableNegative1255605 - 125627624149.1
thiamine phosphate synthaseCMN67_05930Not AvailablePositive1256299 - 125685019537.2

Displaying genes 3941 – 3950 of 13237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.