Sphingomonadaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

The Sphingomonadaceae bacterium is characterized by having a total of five replicons, which indicates a complex genomic structure that may contribute to its adaptability and metabolic versatility. The specific accessions associated with this bacterium are NZAR00000000.1, NZMZ00000000.1, NZDO00000000.1, NYUG00000000.1, and PBLE00000000.1. These accessions are unique identifiers for genomic sequences that provide valuable information regarding its classification and phylogenetic relationships within the Sphingomonadaceae family. This bacterium belongs to a family known for its diverse metabolic capabilities, often involving the degradation of complex organic compounds, which is significant in various ecological contexts, including bioremediation processes. The presence of multiple replicons can be advantageous for the bacterium, as it may allow for the regulation of different sets of genes, potentially enhancing its ability to thrive in varied environments or respond to environmental stresses. Understanding the genomic architecture and ecological roles of Sphingomonadaceae bacteria can provide insights into their potential applications in environmental microbiology, particularly in the degradation of pollutants and the maintenance of ecosystem health. This bacterium exemplifies the complexity and utility of microbial life in natural and engineered environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

546419 bp

Thymine Count

551694 bp

Guanine Count

913631 bp

Cytosine Count

917666 bp

Genome Length

2948989 bp

Protein-coding Genes

2688 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseCMN71_04860Not AvailablePositive999591 - 100007918109.2
transcription elongation factor greaCMN71_04865Not AvailableNegative1000072 - 100053917117.4
carbamoyl phosphate synthase large subunitCMN71_04870Not AvailableNegative1000653 - 1003976120092.0
hypothetical proteinCMN71_04875Not AvailableNegative1003976 - 100436515010.0
carbamoyl phosphate synthase small subunitCMN71_04880Not AvailableNegative1004362 - 100554041494.1
aspartyl-trna amidotransferaseCMN71_04885Not AvailablePositive1005693 - 100614516740.3
hypothetical proteinCMN71_04890Not AvailablePositive1006187 - 100690024400.8
hypothetical proteinCMN71_04895Not AvailablePositive1006908 - 100760023855.8
dna primaseCMN71_04900Not AvailablePositive1007637 - 100949368298.5
rna polymerase sigma factor rpodCMN71_04905Not AvailablePositive1009547 - 101114360022.0

Displaying genes 991 – 1000 of 13237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.