Lysobacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Description

Lysobacteraceae bacterium is characterized by possessing three replicons, which indicates a complex genomic structure. The organization of its genome is evident from the available accessions: SEHB00000000.1, SEHD00000000.1, and QBLY00000000.1. These accessions contribute to the understanding of the bacterium's genetic material, though specific details regarding its gene content and functional capabilities are not provided. The Lysobacteraceae family is known for its diverse metabolic capabilities, often including the degradation of organic matter and various biocontrol properties, which play significant roles in ecological systems. While direct information about the ecological roles of this particular bacterium is limited, members of the Lysobacteraceae family often exhibit traits that are beneficial in soil and plant environments, suggesting potential interactions that could influence nutrient cycling and plant health. In summary, the Lysobacteraceae bacterium, with its tripartite genomic structure and underlying genetic resources as indicated by its sequence accessions, may possess important ecological functions typical of its family. Further research would be necessary to fully elucidate its roles in environmental contexts and potential applications in biotechnology or agriculture.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Lysobacteraceae bacterium isolate PMG_165 scaffold_377417,

Gene Summary

Adenine Count

1481044 bp

Thymine Count

1458388 bp

Guanine Count

2915349 bp

Cytosine Count

2922984 bp

Genome Length

8916245 bp

Protein-coding Genes

8911 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ggdef domain-containing proteinEOP92_35810Not AvailableNegative7163911 - 716500939351.5
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeEOP92_35815Not AvailablePositive7165010 - 716623644020.8
peptidase s8 and s53 subtilisin kexin sedolisinEOP92_35820Not AvailableNegative7166305 - 716764645311.2
abc transporter atp-binding proteinEOP92_35825Not AvailableNegative7167647 - 716882941883.9
yigz family proteinEOP92_35830Not AvailableNegative7168826 - 716941921020.6
abc transporter atp-binding proteinEOP92_35835Not AvailableNegative7170280 - 717119234807.6
succinyldiaminopimelate transaminaseEOP92_35840Not AvailablePositive7171360 - 717259245002.6
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEOP92_35845Not AvailablePositive7172617 - 717290310608.5
aminotransferase class v-fold plp-dependent enzymeEOP92_35850Not AvailableNegative7172904 - 717357623692.7
lrp/asnc family transcriptional regulatorEOP92_35855Not AvailablePositive7173726 - 717421117806.6

Displaying genes 7021 – 7030 of 14928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.