Lysobacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Description

Lysobacteraceae bacterium is characterized by possessing three replicons, which indicates a complex genomic structure. The organization of its genome is evident from the available accessions: SEHB00000000.1, SEHD00000000.1, and QBLY00000000.1. These accessions contribute to the understanding of the bacterium's genetic material, though specific details regarding its gene content and functional capabilities are not provided. The Lysobacteraceae family is known for its diverse metabolic capabilities, often including the degradation of organic matter and various biocontrol properties, which play significant roles in ecological systems. While direct information about the ecological roles of this particular bacterium is limited, members of the Lysobacteraceae family often exhibit traits that are beneficial in soil and plant environments, suggesting potential interactions that could influence nutrient cycling and plant health. In summary, the Lysobacteraceae bacterium, with its tripartite genomic structure and underlying genetic resources as indicated by its sequence accessions, may possess important ecological functions typical of its family. Further research would be necessary to fully elucidate its roles in environmental contexts and potential applications in biotechnology or agriculture.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Lysobacteraceae bacterium isolate PMG_165 scaffold_377417,

Gene Summary

Adenine Count

1481044 bp

Thymine Count

1458388 bp

Guanine Count

2915349 bp

Cytosine Count

2922984 bp

Genome Length

8916245 bp

Protein-coding Genes

8911 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinEOP92_09115Not AvailablePositive1918036 - 191991667494.0
diguanylate cyclaseEOP92_09120Not AvailablePositive1919913 - 192159860463.5
peptidaseEOP92_09125Not AvailablePositive1921806 - 192389075485.9
m13 family peptidaseEOP92_09130Not AvailablePositive1924018 - 192598471190.7
had family phosphataseEOP92_09135Not AvailablePositive1926054 - 192665921417.8
duf1415 domain-containing proteinEOP92_09140Not AvailableNegative1926877 - 192742820134.7
yajq family cyclic di-gmp-binding proteinEOP92_09145Not AvailableNegative1927421 - 192790318007.5
phage tail sheath family proteinEOP92_09150Not AvailableNegative1927951 - 192913243459.4
dmt family transporterEOP92_09155Not AvailablePositive1929220 - 193010131267.7
duf1453 domain-containing proteinEOP92_09160Not AvailablePositive1930101 - 193064020261.7

Displaying genes 1811 – 1820 of 14928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.