Paraburkholderia sp. SOS3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia sp. SOS3 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species is notable for having two replicons, indicating a complex genome organization that may contribute to its adaptability and survival in various environments. The bacterium is cataloged under two accession numbers, NZ_CP018813.1 and NZ_CP018812.1, which provide access to its genomic data in biological databases for further study. These accessions are crucial for researchers seeking to understand the genetic and functional attributes of Paraburkholderia sp. SOS3. From an ecological perspective, the traits of Paraburkholderia sp. SOS3 could imply its role in diverse environments, potentially including soil and water ecosystems, where motility may enhance its ability to colonize and interact with other microorganisms. The dual replicon structure may also suggest a versatile metabolic capacity, allowing it to thrive in varied niches and possibly engage in biogeochemical cycles. Understanding the specific roles and interactions of Paraburkholderia sp. SOS3 within its ecological context could provide insights into its contributions to microbial community dynamics and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia sp. SOS3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

5025 bp

Thymine Count

5382 bp

Guanine Count

8679 bp

Cytosine Count

8491 bp

Genome Length

27577 bp

Protein-coding Genes

38 genes

Non-Coding Genes

9 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribokinaseBTO02_RS25120Not AvailablePositive1143443 - 114438131887.3
lysr substrate-binding domain-containing proteinBTO02_RS25125Not AvailableNegative1144451 - 114538634007.6
nad(p)/fad-dependent oxidoreductaseBTO02_RS25130Not AvailablePositive1145543 - 114688348700.6
transporter substrate-binding domain-containing proteinBTO02_RS25135Not AvailablePositive1146973 - 114779129186.2
amino acid abc transporter permeaseBTO02_RS25140Not AvailablePositive1147884 - 114868128641.5
nad(p)/fad-dependent oxidoreductaseBTO02_RS25145Not AvailablePositive1148719 - 115005648725.3
sdr family nad(p)-dependent oxidoreductaseBTO02_RS25150Not AvailablePositive1150096 - 115077924755.8
class i sam-dependent methyltransferaseBTO02_RS25155Not AvailableNegative1150844 - 115168030265.0
type ii toxin-antitoxin system phd/yefm family antitoxinBTO02_RS25160Not AvailablePositive1151869 - 11521058619.39
type ii toxin-antitoxin system vapc family toxinBTO02_RS25165Not AvailablePositive1152105 - 115248513886.7

Displaying genes 1111 – 1120 of 2744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.