Paraburkholderia sp. SOS3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia sp. SOS3 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species is notable for having two replicons, indicating a complex genome organization that may contribute to its adaptability and survival in various environments. The bacterium is cataloged under two accession numbers, NZ_CP018813.1 and NZ_CP018812.1, which provide access to its genomic data in biological databases for further study. These accessions are crucial for researchers seeking to understand the genetic and functional attributes of Paraburkholderia sp. SOS3. From an ecological perspective, the traits of Paraburkholderia sp. SOS3 could imply its role in diverse environments, potentially including soil and water ecosystems, where motility may enhance its ability to colonize and interact with other microorganisms. The dual replicon structure may also suggest a versatile metabolic capacity, allowing it to thrive in varied niches and possibly engage in biogeochemical cycles. Understanding the specific roles and interactions of Paraburkholderia sp. SOS3 within its ecological context could provide insights into its contributions to microbial community dynamics and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia sp. SOS3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

5025 bp

Thymine Count

5382 bp

Guanine Count

8679 bp

Cytosine Count

8491 bp

Genome Length

27577 bp

Protein-coding Genes

38 genes

Non-Coding Genes

9 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hu family dna-binding proteinBTO02_RS24710Not AvailablePositive1050134 - 105058015284.8
circularly permuted type 2 atp-grasp proteinBTO02_RS24715Not AvailablePositive1051158 - 105256752282.1
alpha-e domain-containing proteinBTO02_RS24720Not AvailablePositive1052590 - 105354035835.8
transglutaminase family proteinBTO02_RS24725Not AvailablePositive1053565 - 105437129215.5
proteasome-type proteaseBTO02_RS24730Not AvailablePositive1054513 - 105541833049.3
porinBTO02_RS24735Not AvailableNegative1055554 - 105675942179.6
yhjd/yihy/brkb family envelope integrity proteinBTO02_RS24740Not AvailableNegative1057139 - 105857248671.0
formate dehydrogenase-n subunit alphaBTO02_RS24750Not AvailablePositive1058837 - 1061908113327.0
formate dehydrogenase subunit betaBTO02_RS24755Not AvailablePositive1061917 - 106287935185.9
formate dehydrogenase subunit gammaBTO02_RS24760Not AvailablePositive1062876 - 106350223988.8

Displaying genes 1031 – 1040 of 2744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.