Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase/phosphodiesterase | EDD54_3133 | Not Available | Positive | 3370625 - 3372607 | 71542.6 |
| gh18 family chitinase | EDD54_3134 | Not Available | Negative | 3372656 - 3374332 | 59491.7 |
| n-carbamoyl-l-amino-acid hydrolase | EDD54_3135 | Not Available | Negative | 3374638 - 3375888 | 44911.7 |
| hypothetical protein | EDD54_3136 | Not Available | Negative | 3375919 - 3376380 | 16342.8 |
| prevent-host-death family protein | EDD54_3137 | Not Available | Negative | 3376373 - 3376621 | 8911.72 |
| cupin domain | EDD54_3138 | Not Available | Negative | 3376688 - 3376987 | 10974.0 |
| malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | EDD54_3139 | Not Available | Negative | 3377070 - 3378563 | 53459.1 |
| beta-alanine--pyruvate transaminase | EDD54_3140 | Not Available | Negative | 3378821 - 3380152 | 48710.7 |
| xre family transcriptional regulator | EDD54_3141 | Not Available | Positive | 3380330 - 3380878 | 19925.6 |
| restriction system protein | EDD54_3142 | Not Available | Positive | 3380977 - 3381876 | 33560.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
